| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2908 |
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| Symbol | |
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| ID | 4003901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 1714538 |
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| End bp | 1717660 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637946730 |
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| Product | multidrug efflux system protein |
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| Protein accession | YP_558120 |
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| Protein GI | 91782914 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.442487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.66419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAT CCCGCGCTTT TATTCTGCGT CCCGTCGGCA CCGCGCTGCT GATGGCGGCG
ATCATGCTGG TCGGTCTCGT CGCGCTGCGC TTCCTGCCGC TCTCCGCGCT GCCCGAGGTC
GACTATCCGA CCATCCAGGT GCAGACCTTC TATCCGGGCG CGAGCCCGGA CGTGATGACG
TCGTCGGTCA CCGCGCCGCT CGAACGCCAG TTCGGGCAGA TGCCGTCGCT CAATCAGATG
TCCTCGCAAA GCTCGGCCGG CTCGTCGATC ATCACGCTGC AATTCAGCCT CGATCTGCCG
CTCGACATCG CCGAACAGGA AGTGCAGGCC GCCATCAACG CGGCCGGCAA CCTGCTGCCC
TCGGACCTGC CCGCGCCGCC GATCTACGCC AAGGTCAATC CGGCCGACGC GCCGATCATC
ACGCTCGCGA TCACCTCGAA GACGCTGCCG CTCACGCAGG TGCAGGATCT GGCCGACACG
CGTCTCGCGC AGAAAATCTC GCAGGTGGCG GGCGTGGGCC TGGTGAGCTT GTCGGGCGGC
CAGCGCCCGG CCGTGCGCAT TCAGGCGAAC CCGCGCGCGC TCGCCGCGTA CGGCCTGAAT
CTCGACGACC TGCGCACCAC CATCTCGAAC CTGAACGTCA ACACGCCGAA GGGCAATTTC
GACGGCCCCA CGCGCAACTA CACGATCAAC GCGAACGACC AGTTGACCGA CGCCGACGCC
TACAAGAGCG CGGTGGTCGC GTACAAGAAC GGCCGCGCGG TGATGCTGAC CGACGTGGCC
ACCATCGTAC AGGGCGCCGA GAACACCAAG CTCGGCGCAT GGGTGGACGG CACGCCCGCG
ATCATTCTGA ACGTGCAGCG CCAGCCGGGC GCGAACGTGA TCCAGGTGGT GGACAGCATC
AAGAAGCTGC TGCCGCAATT GCAGCAGGCG CTGCCCGCCG CGCTGGACGT GGAAATCGTC
ACCGACCGTA CCACCACGAT CCGCGCTTCC GTGCGCGACG TGCAGTTCGA ACTCGCGATG
TCGGTCGTGC TGGTGGTGAT GGTGATGTAC CTGTTCCTCG CCAACATCTA CGCGACCATC
ATTCCGAGTC TCTCGGTGCC GCTGTCGCTG ATCGGCACGC TCGCCGTGAT GTACCTGTGC
GGCTTCTCGC TGGACAACCT GTCCCTGATG GCGCTGACCA TCGCGACCGG TTTCGTGGTG
GACGACGCGA TCGTGATGAT CGAGAACATC GCGCGTTATG TCGAAGACGG CGAGTCGCCG
CTCGAAGCCG CGCTGAAGGG TTCGAAACAG ATCGGCTTCA CCATCATTTC GCTGACGGTT
TCGCTGATCG CCGTGCTGAT TCCGCTGCTT TTCATGGGCG ACGTGGTCGG CCGCCTGTTC
CACGAATTCG CCATTACGCT CGCCGTGACG ATCGTGATCT CGGCAGTCGT GTCGCTCACG
CTGGTGCCGA TGATGTGCGC GAAACTGCTG CGCCACACGC CGCCGCACGA GAACCACCGT
TTCGAGGCCA AAGCGCACCG CGCGATCGAC TGGGTGATCG CACGCTATGC GGTCGCGCTC
ACGTGGGTGC TGAACCGGCA ACGCTCCACG CTGGTCGTCG CACTCCTCAC GCTGGTGCTG
ACCGGCCTGC TGTACGTGTA CATTCCGAAG GGCTTCTTCC CGGTGCAGGA CACCGGCGTG
ATCCAGGCGA TCACGCAGGC GCCGCAGTCG GTATCGTATG CGTCGATGGC CGAGCGCCAG
CAGGAACTCG CCGCGCAGAT CCTGAAGAAT CCGGACGTGG AAAGCCTGAC TTCGTTCATC
GGCGTGGACG GCAGCAATAT CACGCTGAAC AGCGGCCGCA TGCTGATCAA CCTGAAGCCG
CGCGACGACC GCAGCAACAC CGCGAGCGAA GTGATCCGCC AGTTGCAGCG GGATGTGGCG
CATATTCCGG GCGCGTCGCT GTACATGCAA CCGGTGCAGG ACCTGACCAT CGACTCGACG
GTGAGCCCCA CGCAGTACCA GTTCATGCTG ACCGATCCGA ACATCGGCGA ATTCACCACG
TGGGTGCCCA AGCTTGTCGA GCGCCTGCGG CAGTCGCCCG AACTGGCGGA CGTGGCGACG
GATCTGCAGG ACAACGGCCA GTCGGTCTAC ATCGAAATCG ACCGCGCCAC CGCGTCGCGT
TATGGCATCA CGCCGGCCAC CGTGGATAGC GCGCTGTACG ACGCGTTCGG CCAGCGCATC
ATCTCGACCA TCTTCACGCA GTCGAACCAG TACCGCGTGA TTCTGGAAGC GCAGCCGGAA
ATGCAGCACT ACACCGAATC GCTGAAGTCG ATCTATCTGC CCTCTTCCAC GTCCACGGGC
GGACAGGTGC CGCTCTCCTC GATCGCGCGC TTCATCGAGA AGCCCGCGCC GCTGCTGGTC
ACGCACCTGA GCCAGTTCCC GGCCACCACC GTGTCGTTCA ACCTTGCGCC GGGCTCGTCG
CTCGGTGCGG CGGTGAAGGC GATCGACCAG GCGCAGAAAG ACATCGGCTT GCCCGCGTCG
TTCCAGACGC GCTACCAGGG CGCGGCGCTG GCATTCCAGG CGTCGCTGTC GAACGAGCTG
TTCCTGATCC TCGCGGCGAT CGTCACGATG TATATCGTGC TGGGCGTGCT GTACGAGAGC
TTCATCCATC CAATCACGAT TCTCTCCACG CTGCCCTCGG CCGGTGTCGG CGCGCTGCTC
GCGCTGCTCG TTACCGGGCA CGATCTGGAC ATCATCGGCA TCATTGGCAT CGTGCTGCTG
ATCGGTATCG TGAAGAAGAA CGCGATCATG ATGATCGACT TCGCGCTCTA CGCCGAGCGC
GAAGAAGGCA AGCCGCCGCG CGAGGCGATC TATCAGGCGT GTCTGCTGCG TTTCCGGCCG
ATCCTGATGA CCACGCTCGC CGCCCTGCTC GGCGCGCTGC CGCTGATGCT CGGCACGGGT
GCCGGCTCGG AGCTGCGCCG TCCGCTCGGT ATCGCGATTG CGGGCGGGTT GATCGTCAGC
CAGTTGCTGA CGCTCTTCAC CACGCCGGTG ATCTACCTCG CGTTCGACTC GCTCGGGCGC
CGCGTGCGTG AGCGCTTCAA TCGGGGCAAG CCCACGCCGC CCGTCACCGA CGCGGGGAAC
TGA
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| Protein sequence | MNPSRAFILR PVGTALLMAA IMLVGLVALR FLPLSALPEV DYPTIQVQTF YPGASPDVMT
SSVTAPLERQ FGQMPSLNQM SSQSSAGSSI ITLQFSLDLP LDIAEQEVQA AINAAGNLLP
SDLPAPPIYA KVNPADAPII TLAITSKTLP LTQVQDLADT RLAQKISQVA GVGLVSLSGG
QRPAVRIQAN PRALAAYGLN LDDLRTTISN LNVNTPKGNF DGPTRNYTIN ANDQLTDADA
YKSAVVAYKN GRAVMLTDVA TIVQGAENTK LGAWVDGTPA IILNVQRQPG ANVIQVVDSI
KKLLPQLQQA LPAALDVEIV TDRTTTIRAS VRDVQFELAM SVVLVVMVMY LFLANIYATI
IPSLSVPLSL IGTLAVMYLC GFSLDNLSLM ALTIATGFVV DDAIVMIENI ARYVEDGESP
LEAALKGSKQ IGFTIISLTV SLIAVLIPLL FMGDVVGRLF HEFAITLAVT IVISAVVSLT
LVPMMCAKLL RHTPPHENHR FEAKAHRAID WVIARYAVAL TWVLNRQRST LVVALLTLVL
TGLLYVYIPK GFFPVQDTGV IQAITQAPQS VSYASMAERQ QELAAQILKN PDVESLTSFI
GVDGSNITLN SGRMLINLKP RDDRSNTASE VIRQLQRDVA HIPGASLYMQ PVQDLTIDST
VSPTQYQFML TDPNIGEFTT WVPKLVERLR QSPELADVAT DLQDNGQSVY IEIDRATASR
YGITPATVDS ALYDAFGQRI ISTIFTQSNQ YRVILEAQPE MQHYTESLKS IYLPSSTSTG
GQVPLSSIAR FIEKPAPLLV THLSQFPATT VSFNLAPGSS LGAAVKAIDQ AQKDIGLPAS
FQTRYQGAAL AFQASLSNEL FLILAAIVTM YIVLGVLYES FIHPITILST LPSAGVGALL
ALLVTGHDLD IIGIIGIVLL IGIVKKNAIM MIDFALYAER EEGKPPREAI YQACLLRFRP
ILMTTLAALL GALPLMLGTG AGSELRRPLG IAIAGGLIVS QLLTLFTTPV IYLAFDSLGR
RVRERFNRGK PTPPVTDAGN
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