| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2892 |
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| Symbol | |
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| ID | 4003709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 1734318 |
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| End bp | 1737584 |
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| Gene Length | 3267 bp |
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| Protein Length | 1088 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637946744 |
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| Product | RND family hydrophobe/amphiphile efflux pump |
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| Protein accession | YP_558134 |
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| Protein GI | 91782928 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCT CAAAGTTTTT CATCGACAGG CCAATCTTCG CCGCCGTTCT GTCGGTGGTG
ATTGTGCTCG CGGGCTTTAT CGCGCTGACC AAATTGCCAA CGGCCGAATA TCCGGAAGTC
GTGCCTCCAT CGGTAGTCGT ACGCGCACAG TACCCCGGTG CGAATCCGAA AGTCATTGCG
GAAACCGTCG CCTCTCCAAT TGAAGAGCAG ATCAACGGCG TCGAGAACAT GCTGTACATG
CAGTCGCAGG CCAACAGCGA CGGCGCAATG ACGACGACCG TCACGTTCAA GCTCGGCACC
GATCCGGACA AGGCACAGCA ACTCGTGCAG AACCGCGTAT CGCAGGCCAT GCCGCGTCTT
CCCGAGGACG TGCAGCGCCT GGGCGTGACG ACCATCAAGT CGTCGCCTAC CCTGACGATG
GGCGTGAATC TCGTCTCGCC GAACGGCCGC TACGACCTTA CCTATCTGCG CAACTATGCG
CTCATCAACA TCAAGGACCG GCTTGCGCAG GTCCCGGGCG TTGGCGAAGT TGCGATGTGG
GGCGCGGGCG ACTACTCCAT GCGCGTCTGG CTCGACCCGA CAAAGGTAGC CCGTCAGAAC
CTGACGGCAA CGGACGTCGT GAAGGCAATC CGTGAGCAGA ACGTCCAGGT TGCGGCGGGT
ATCGTCGGCG GTGCGCCGAT GACGACGAAC GTTCCGATGC AACTGAGCGT GAACGCTCAG
GGTCGCCTGA AGACCGAGGA AGAGTTTCGC AACATCATCC TGAAGACCTC GCCCGACGGT
GCAGTGACGC ATCTGAGCGA TGTGGCGCGC GTGGAAATGG GTGCAGCGGA ATATGCTCTG
CGCGCAAGTC TGGACGGCAA GCCTGGCGTG CAGCTCATCA TCTTCCAGCA GCCCAACGCA
AATTCGCTTC AGATTTCGAC GGATGTTCGC CGCATCACCG CGGAGTTGCA AAAGGACATG
CCCGAAGGCG TCGAGGCGAA GATTGTCTAC GACCCGACGC AGTTCGTCCG CGAAAGCATC
GACGCGGTGG TCCATACGCT TTTCGAAGCT ATCGTCCTTG TCGTTATCGT CGTCATCGTC
TTCCTGCAGA CGTGGCGCGC ATCGCTGATT CCGTTGCTGG CGGTGCCTGT CTCGATTGTG
GGCACCTTCT CGCTGATGCT GGCCTTCGGC TTCACCATCA ACGCGCTGTC ATTGTTCGGC
ATGGTTCTCG CCATCGGGAT TGTGGTCGAC GATGCAATTG TGGTGGTGGA GAACGTCGAG
CGGAATATTG CCTCCGGTCT CACGCCACTC GAGGCCTCGT ACGAAGCGAT GCGGGAAGTG
AGCGGTCCGA TTATCGCCAT TGCGCTGACG CTGGTTGCGG TGTTCGTGCC GCTGGCATTC
ATGTCGGGTT TGACCGGCCA GTTCTACAAG CAGTTCGCGA TGACCATTGC GATTTCGACC
GTCATCTCCG CGTTCAACTC GCTCACGCTG TCGCCCGCCC TGTCGGCTTT GCTGCTCAAG
GATCACCACG CGCCTGAAGA CTGGCTCACC CGGGTCATGG ACCGCATCCT CGGACCGTTC
TTCAACGTGT TCAACAAGGT GTTCCATCGT GGCTCGGAAG CGTACGGCAA GGGTGTGGGC
GGCATTATCA ATCGCAAGGC CGCGATGATG GTCGTCTACG GCGTCCTGCT GGGCGGCACG
TTCCTGCTTG GCAAGATTGT CCCGGGTGGC TTTGTGCCGG GTCAGGACAA GGACTATCTC
GTCAGCATCC TGCAGTTGCC CCCGGGCGCA TCGCTCGACC GCACTGAAAA AGTGGTTCAC
GAAATGGGCG TCATTGCCCG CAAACAGCCG GGTGTCGTGC ATTCGCCGGA ATTTCCGGGC
CTGAACGTGA CCGGCCTGAT GAATTCGTCG AGCAGCGGCC TGGTGTTCCC CGTCATGAGC
CCCTCGAAGG AGCGCAGCAA GGATGAATCG GCGGCGGCGA TTGTCGGCAA CCTGAACAAG
GAATACGCCG GCATCAAGGA CGCGATGATT GCCACCTTCC CGCCTCCTCC GGTCTCGGGT
CTGGGCACGA TCGGCGGCTT CAAGCTGCAG ATTGAAGACC GTGGCGCGCT GGGTTACGAA
GCCCTGAACA AGGCGGTGCA GTCGTTCCTC GCGGCAGCAG CAAAAGCACC GGAACTCGGC
CCCTCGTTCT CGAGTTACCA GATTAACGTT CCGCAACTGA ACGTCGAACT GGACCGTGAA
AAGGCCAAGC AACTCGGTGT CTCGGTCACT GACGTGTTCG ACACGATGCA GATTTATCTG
GGCTCGCTGT ACGTGAACGA CTTCAACAAG TTCGGTCGCG TCTATCAGGT GCGTGCGCAG
GCCGATGCCC CATTCCGTAC CTCGGCCGAA AGCATTCTCC AGCTCAAGAC CCGCAATGCC
GCAGGCGAGA TGGTGCCGTT GTCGTCGCTC ATCAAGGTAA CGCCTACGTT CGGTCCGGAG
ACGGTGATTC GCTACAACGG CTTCCTTGCT GCGGACATCA ACGGTGGACC CGCTCCGGGA
TATTCGTCTG GCCAGGCGAT GGCGGCGGTC GAACGCATCG CGGCTGAAAC CTTGCCGCGA
GGTATCAAGT TTGAATGGAC CGACTTGACC TACCAGCAGA TTCTGACCGG CAACGCCGCG
TTCTGGGTGT TCCCGATCAG CGTGCTGCTC GTGTTCCTCG TGCTGGCCGC CATGTACGAA
AGCCTGACGC TGCCGCTCGC GATTCTGCTG ATTGTGCCGA TGAGCATTCT GTCCGCGCTC
TTTGGTGTGT GGCTCACGCG TGGCGACAAC AATATCTTCA CGCAGATTGG TCTGATGGTG
CTGGTGGGAC TGTCCGCGAA GAACGCGATT CTGATTGTGG AGTTCGCACG CGAGCTGGAA
ATGCAGGGCC GTTCGATTGT TCAGGCCGCG ATTGAAGCCT GCCGGCTGCG TCTGCGCCCG
ATTCTGATGA CGTCCATCGC GTTCATCATG GGTGTGATTC CCCTGGTGAT TTCCACGGGA
GCGGGTTCGG AAATGCGTCG CGCGATGGGC ATCGCGGTGT TCTTCGGCAT GTTGGGCGTA
ACCCTTTTCG GTCTGATACT CACACCGGTG TTCTACGTGC TTCTGCGCAA GCTCTCGGGC
GGCAGGCAGC TTACCGACAG ACATGGCAAC CACCCGCACA TTCACGGGCC GGATGACCGC
GACGGCGGCC ATGGCGGAAG CGGTGGCTCG ACGGGTGCTC CTGCCAGACC CGGCGTAAAG
GCTCCCGAGC CGGCATTCCA GGAGTAA
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| Protein sequence | MNISKFFIDR PIFAAVLSVV IVLAGFIALT KLPTAEYPEV VPPSVVVRAQ YPGANPKVIA
ETVASPIEEQ INGVENMLYM QSQANSDGAM TTTVTFKLGT DPDKAQQLVQ NRVSQAMPRL
PEDVQRLGVT TIKSSPTLTM GVNLVSPNGR YDLTYLRNYA LINIKDRLAQ VPGVGEVAMW
GAGDYSMRVW LDPTKVARQN LTATDVVKAI REQNVQVAAG IVGGAPMTTN VPMQLSVNAQ
GRLKTEEEFR NIILKTSPDG AVTHLSDVAR VEMGAAEYAL RASLDGKPGV QLIIFQQPNA
NSLQISTDVR RITAELQKDM PEGVEAKIVY DPTQFVRESI DAVVHTLFEA IVLVVIVVIV
FLQTWRASLI PLLAVPVSIV GTFSLMLAFG FTINALSLFG MVLAIGIVVD DAIVVVENVE
RNIASGLTPL EASYEAMREV SGPIIAIALT LVAVFVPLAF MSGLTGQFYK QFAMTIAIST
VISAFNSLTL SPALSALLLK DHHAPEDWLT RVMDRILGPF FNVFNKVFHR GSEAYGKGVG
GIINRKAAMM VVYGVLLGGT FLLGKIVPGG FVPGQDKDYL VSILQLPPGA SLDRTEKVVH
EMGVIARKQP GVVHSPEFPG LNVTGLMNSS SSGLVFPVMS PSKERSKDES AAAIVGNLNK
EYAGIKDAMI ATFPPPPVSG LGTIGGFKLQ IEDRGALGYE ALNKAVQSFL AAAAKAPELG
PSFSSYQINV PQLNVELDRE KAKQLGVSVT DVFDTMQIYL GSLYVNDFNK FGRVYQVRAQ
ADAPFRTSAE SILQLKTRNA AGEMVPLSSL IKVTPTFGPE TVIRYNGFLA ADINGGPAPG
YSSGQAMAAV ERIAAETLPR GIKFEWTDLT YQQILTGNAA FWVFPISVLL VFLVLAAMYE
SLTLPLAILL IVPMSILSAL FGVWLTRGDN NIFTQIGLMV LVGLSAKNAI LIVEFARELE
MQGRSIVQAA IEACRLRLRP ILMTSIAFIM GVIPLVISTG AGSEMRRAMG IAVFFGMLGV
TLFGLILTPV FYVLLRKLSG GRQLTDRHGN HPHIHGPDDR DGGHGGSGGS TGAPARPGVK
APEPAFQE
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