| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2823 |
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| Symbol | |
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| ID | 4003183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 1817878 |
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| End bp | 1819779 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637946802 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_558192 |
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| Protein GI | 91782986 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACACATA CCCACGACAC CGATTCGTCC GAATCCGAGC GCGCCGTGCC ATCGGCTCGC
GCCGACGAAA CGCGCACCAC TCAAGCGTCG GCAGGCGAGG GCGAGCGCCC GGCGCAGACC
ACGGAAGCAG ACGGTGAAGA CCGTCCGCGC CGCGGCCTGC GTCGCGGGCC GCGCAGCCTG
ATCGCGCGGC GCCGCGCCGG CGCGAAGACG AAGGGCGCCG AAGGCGCCGC CGCGCAGGAG
GCGCCGGTTG TCGGCGAGGC GCCACCGGAT GGCGAGGTCG TCGCGCAAGT GCGTATGCCG
CGCAAGGATG CAGGCGCCAA GGGTCAGGGA TCGCGGCGCA ATGCAGGCGG CGCGCGCCGC
GAAGGCGCGC CGCGTGAAGG TGCCGCACGT GAAGGCGCAC CTCGCGAAGG CCAGCGCGAG
CGTCAGCCGC GTGAAGGTCA GCCGCGCGAA GGCGGCCAGC GTCAGAATCG CCGCGGCGGT
GAAGCGCCGG CGGTTGCGAC GGAGGCGGGT CAGGACGATC TGTTCTCGTA CGTCACGTCG
CCCGCCTTCG ACGCGGACAA CAGCGCCACC GGCGGCGTGC GCGCTCCGAT GCTGCGTCGT
GGCAAGCCGG TCGCGCCCAA GCGCGTACTC GCCGCGGACG ACGACGCACC AAAGCTGCAC
AAAGTGCTGG CCGAAGCCGG CATGGGTTCG CGCCGCGACA TGGAAGAGCT GATCGTTGCC
GGCCGGGTGT CGGTGAATGG CGAGCCGGCT CATATCGGCC AGCGCATCAT GCCGACCGAC
CAGGTTCGCA TCAACGGCAA GCCGGTCAAG CGCAAACTGG CCAGCAAGCC GCCGCGTGTG
CTGCTGTATC ACAAACCGAC CGGCGAAATC GTCAGCCATG CCGATCCGGA AGGCCGTCCT
TCGGTGTTCG ACAAGCTGCC GCCGATGAAA ACCGCCAAGT GGCTCGCGGT CGGCCGTCTC
GATTTCAACA CGGAAGGTCT GCTGATGCTG ACCACGTCGG GCGATCTGGC GAACCGTTTC
ATGCACCCGC GTTATAGCGT CGAGCGTGAA TATGCGGTGC GCGTGGTCGG CGAACTGGCC
GAAGGCATGC GTCAGAAGCT TCTGCATGGC GTCGAGCTGG ACGACGGCCC GGCGAACTTC
CTGCGGATTC GCGACGGCGG CGGCGAAGGC ACCAATCACT GGTATCACGT CGCGCTCGCC
GAAGGGCGTA ACCGCGAAGT GCGTCGTATG TTCGAAGCGG CCGGCCTGAT GGTCAGCCGC
CTGATCCGTA CCCGTCACGG CCCGATCTCG CTGCCCAAGG GGCTCAAGCG CGGTCGTTGG
GAAGAGTTGG AAGACAACCA GGTGCGTGCA CTGATGGCGT CGGTGGGCCT GAAGGCGCCG
ACTGAAGAGC GCGGCAGCCG CAATGCGGCG CCGGAACGCA AGCAGCCGGA TCCGATGCAA
ACGTCGATGG GTTTCATTAA CCGTGAGCCG GTGTTGATGT CGCATGGCCG TTTCGATCAG
CAGCCGCCAC GCGGCCAGGG GCGGCGCGGT GGTGCGGCAG GCGGCGGTTT TGCTGGCGGC
GCGGGCGCGG GTTTTGGCGG CGGCTATGGC AATCGCGGTG CCGGCCGCAG CGCCGGTGGC
TTCGGCGGCC CGATGGGCGC GGGTGGGGGT GCGGGCGGCC CGCGTGGCGG CCGTGAAGTC
GACGGCAACC GCGCGCCGTC GGGCAATGGC AATCGTGCGG CAGGCGGCGG CAAGCGTGTC
GGCGGTGCCG GTGCCGGTGC CAATCCGGGC AATGGCGGCA ACAACCGCGG CCCGGCCGGC
AATCGGGGCG GCAACGCCAA TCGCGCGGGC GGCGGAAACG CCAGTCCGGG CGGCGCCAAT
CGCGGCGGCG GCGCACCGCG CGGCCGTTCG CGTGGCCGTT GA
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| Protein sequence | MTHTHDTDSS ESERAVPSAR ADETRTTQAS AGEGERPAQT TEADGEDRPR RGLRRGPRSL
IARRRAGAKT KGAEGAAAQE APVVGEAPPD GEVVAQVRMP RKDAGAKGQG SRRNAGGARR
EGAPREGAAR EGAPREGQRE RQPREGQPRE GGQRQNRRGG EAPAVATEAG QDDLFSYVTS
PAFDADNSAT GGVRAPMLRR GKPVAPKRVL AADDDAPKLH KVLAEAGMGS RRDMEELIVA
GRVSVNGEPA HIGQRIMPTD QVRINGKPVK RKLASKPPRV LLYHKPTGEI VSHADPEGRP
SVFDKLPPMK TAKWLAVGRL DFNTEGLLML TTSGDLANRF MHPRYSVERE YAVRVVGELA
EGMRQKLLHG VELDDGPANF LRIRDGGGEG TNHWYHVALA EGRNREVRRM FEAAGLMVSR
LIRTRHGPIS LPKGLKRGRW EELEDNQVRA LMASVGLKAP TEERGSRNAA PERKQPDPMQ
TSMGFINREP VLMSHGRFDQ QPPRGQGRRG GAAGGGFAGG AGAGFGGGYG NRGAGRSAGG
FGGPMGAGGG AGGPRGGREV DGNRAPSGNG NRAAGGGKRV GGAGAGANPG NGGNNRGPAG
NRGGNANRAG GGNASPGGAN RGGGAPRGRS RGR
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