| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2816 |
|---|
| Symbol | |
|---|
| ID | 4003764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 1828670 |
|---|
| End bp | 1829911 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637946809 |
|---|
| Product | major facilitator superfamily efflux pump membrane fusion protein |
|---|
| Protein accession | YP_558199 |
|---|
| Protein GI | 91782993 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.106074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.653781 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTC CCCAGCAGCC CGCGGCTACC AACACACAGC CGGCACAACC GGCGAACAAC
GGCAAACGCA AGCGCATGAT GACGCTGCTT GTGATCGTGA TCCTGATCGC CGCGATCGCT
TACGGCCTGT ACTACTTCCT CGTCGCGCGC TTCCACGAAG ACACCGACGA CGCCTACGTG
AACGGCAACG TCGTCCAGAT CACGCCGCAA GTCACCGGCA CGGTCGTGGC CGTGAACGCG
GACGACACGC AAACGGTGAA GGCCGGCGAC CCGCTCGTCG TGCTCGATCC GGCCGACGCC
CGCGTCGCGC TGGAACAGGC TGAAGCGAAT CTCGCGCAGA CGGTGCGCCA GGTGCGCGGC
CTGTTCGCCG ACGACAATCA ATACCAGGCG CAAGTGGCCC AGCGCCAGTC CGATCTGTCG
CGCGCCCAGG ACGACCTGAA GCGCCGTCTG ACGGTCGCGC AAACCGGCGC CGTGTCGCAG
GAAGAAATCT CGCATGCCCG CGACGCCGTG AAGAGCGCGC AAGCCGCCGT CGACGCCGCC
CAGCAGCAAC TGGCGTCGAA CCGCGCGCTG ACCGCCAACA CCACGATCGC GAATCACCCG
AACGTGCAGG CCGCCGCGGC CAAGGTCCGC GACGCGTACC TGAGCAACGC GCGCAACAAC
CTGCCGGCGC CGGTCACGGG CTACGTGGCG AAACGCTCGG TGCAGGTCGG CCAGCGCGTC
TCGCCGGGCA CCCCGCTGAT GGCGATCGTG CCGCTCGGCG GCGTGTGGGT CGACGCGAAC
TTCAAGGAAG TGCAGCTCAA GCACATGCGC ATCGGCCAGC CGGTCGAACT GACGGCCGAC
GTGTACGGCT CGTCGGTGGT GTTTCACGGC AAGGTGGTCG GCTTCTCGGC GGGCACGGGT
TCGGCGTTCT CGCTGCTGCC CGCGCAGAAC GCCACCGGCA ACTGGATCAA GGTGGTGCAG
CGTCTGCCGG TGCGGATCGC GCTCGATCCC AAAGAACTCG AACAGCACCC GCTGCGTATC
GGCCTGTCGA TGCAAGCCGA CGTGACCATC AAGGACGACA ACGGCGGCCA GCTCGGCGAG
GCACCGAACA CGGTCTATCA GACCAACGTG TTCGAGAAAT ACGGCGACCA GGCCGACGCG
GAAATCGCCC GCATCATTTC GGAAAACGCA GGCCCGAACG GCGGCTCGCA GAAGTCGGCC
CAGGCCGGCG GCGCGAAGCC TGCCGCTGCG AAGCTGATGT AA
|
|---|
| Protein sequence | MSTPQQPAAT NTQPAQPANN GKRKRMMTLL VIVILIAAIA YGLYYFLVAR FHEDTDDAYV
NGNVVQITPQ VTGTVVAVNA DDTQTVKAGD PLVVLDPADA RVALEQAEAN LAQTVRQVRG
LFADDNQYQA QVAQRQSDLS RAQDDLKRRL TVAQTGAVSQ EEISHARDAV KSAQAAVDAA
QQQLASNRAL TANTTIANHP NVQAAAAKVR DAYLSNARNN LPAPVTGYVA KRSVQVGQRV
SPGTPLMAIV PLGGVWVDAN FKEVQLKHMR IGQPVELTAD VYGSSVVFHG KVVGFSAGTG
SAFSLLPAQN ATGNWIKVVQ RLPVRIALDP KELEQHPLRI GLSMQADVTI KDDNGGQLGE
APNTVYQTNV FEKYGDQADA EIARIISENA GPNGGSQKSA QAGGAKPAAA KLM
|
|---|
| |