| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2813 |
|---|
| Symbol | |
|---|
| ID | 4003767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 1832401 |
|---|
| End bp | 1834227 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637946812 |
|---|
| Product | GTP-binding protein TypA |
|---|
| Protein accession | YP_558202 |
|---|
| Protein GI | 91782996 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.472576 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCGCG CCCTACGCAA CATCGCCATC ATTGCCCACG TCGACCACGG CAAGACCACG
CTCGTCGACC AGCTTCTCCG CCAGACCGCC ACGTTCCGCG ACAACCAGCA GATCGCCGAG
CGCGTGATGG ACTCGAACGA CATCGAAAAA GAACGCGGTA TCACGATTCT GTCGAAGAAC
TGCGCGGTCG AATATGAAGG CACGCACATC AACATCGTCG ACACCCCGGG CCACGCTGAC
TTCGGCGGCG AAGTGGAGCG CGTGCTGTCG ATGGTCGACT CCGTGCTGCT GCTGGTCGAC
GCCGTCGAAG GCCCGATGCC GCAAACGCGC TTCGTGACCA AGAAGGCACT GGCGCTCGGC
CTGAAGCCGA TCGTCGTGAT CAACAAGGTG GACCGTCCGG GCGCGCGGAT CGACTGGGTG
ATCAACCAGA CGTTCGACCT GTTCGACAAG CTGGGCGCAA CCGACGAACA ACTCGATTTT
CCGATCGTCT ACGCATCGGG TCTGAACGGC TACGCAGGCT TGACCCCGGA CGTGCGCGAA
GGCGACATGC GCCCGCTGTT CGAAGCCGTG CTGCAACACG TGCCGGTTCG TCCGGCCGAT
CCGGACGCAC CGCTGCAACT GCAGATCACG TCTCTGGACT ATTCGTCGTA TGTCGGCCGT
ATCGGCGTGG GCCGTATCAC GCGCGGCCGC ATCAAGCCGG GCATGGCGGT CGCCGTGCGT
TCGGGCCCCG ACGGCGCGAT CCTGAACCGC AAGATCAACC AGGTGCTGTC GTTCAAGGGC
CTCGAGCGCG TGCAGGTCGA CTCGGCTGAA GCCGGCGACA TCGTGCTGAT CAACGGCATC
GAAGAAATCG GCATTGGCGT GACCATCTGC GCGCCGGAGC AACCGGAAGC GCTGCCCATG
ATCACCGTGG ACGAACCCAC GCTGACCATG AACTTCCTCG TCAATTCGTC GCCGCTGGCC
GGTCGCGAAG GCAAGTTCGT CACGAGCCGT CAGATCCGTG ACCGCCTGAT GAAGGAACTG
AACCACAACG TCGCGCTGCG CGTGAAAGAA ACCGGCGACG AAACCACGTT CGAAGTGGCG
GGCCGCGGTG AACTGCACCT GACCATTCTG GTGGAAAACA TGCGCCGCGA AGGCTACGAG
CTGGCCGTGT CGCGTCCGCG CGTGGTGATG ACGGAAGTGG ACGGGGTGAA GCACGAGCCG
TACGAAAACC TGACGGTCGA CATGGAAGAC GCCCATCAAG GCGGCGTGAT GGAAGAGCTG
GGCCGCCGCA AGGGTGAAAT GCTCGACATG GCGTCGGACG GCCGTGGCCG TACGCGTCTG
GAGTACCGTA TTTCGGCGCG TGGCCTGATC GGCTTCCAGT CGGAATTCCT CACGCTCACG
CGCGGTACGG GTCTGATGAG CCACACGTTC GACTCGTATC AGCCGGTCAA GGAAGGCGCG
GTCGGCGAGC GTCGCAACGG CGTGCTGATT TCGCAGGACG ACGGCGCGGC AGTCGCGTAC
GCATTGTGGA AGCTGCAGGA TCGCGGCCGC ATGTTCGTGT CGCCGGGCGA GCCGCTGTAT
GAGGGCATGA TCATCGGCAT TCACAGCCGT GACAACGACC TGGTGGTCAA CCCGATCAAG
GGCAAGCAGT TGACCAACGT GCGTTCGTCG GGTACGGACG AAGCGGTGCG CCTCGTGCCG
CCGATCCAGA TGTCGCTGGA ATACGCGGTC GAATTCATCG ACGACGACGA ACTGGTCGAA
GTCACGCCGC AGTCCATCCG TCTGCGCAAG CGTTATCTGA AGGAACATGA GCGCCGCAGC
GCGAGCCGTA AGGGCGCGGT GGACTAA
|
|---|
| Protein sequence | MTRALRNIAI IAHVDHGKTT LVDQLLRQTA TFRDNQQIAE RVMDSNDIEK ERGITILSKN
CAVEYEGTHI NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVEGPMPQTR FVTKKALALG
LKPIVVINKV DRPGARIDWV INQTFDLFDK LGATDEQLDF PIVYASGLNG YAGLTPDVRE
GDMRPLFEAV LQHVPVRPAD PDAPLQLQIT SLDYSSYVGR IGVGRITRGR IKPGMAVAVR
SGPDGAILNR KINQVLSFKG LERVQVDSAE AGDIVLINGI EEIGIGVTIC APEQPEALPM
ITVDEPTLTM NFLVNSSPLA GREGKFVTSR QIRDRLMKEL NHNVALRVKE TGDETTFEVA
GRGELHLTIL VENMRREGYE LAVSRPRVVM TEVDGVKHEP YENLTVDMED AHQGGVMEEL
GRRKGEMLDM ASDGRGRTRL EYRISARGLI GFQSEFLTLT RGTGLMSHTF DSYQPVKEGA
VGERRNGVLI SQDDGAAVAY ALWKLQDRGR MFVSPGEPLY EGMIIGIHSR DNDLVVNPIK
GKQLTNVRSS GTDEAVRLVP PIQMSLEYAV EFIDDDELVE VTPQSIRLRK RYLKEHERRS
ASRKGAVD
|
|---|
| |