| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2795 |
|---|
| Symbol | |
|---|
| ID | 4004979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 1855795 |
|---|
| End bp | 1856874 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637946830 |
|---|
| Product | putative tight adherence TadB related transmembrane protein |
|---|
| Protein accession | YP_558220 |
|---|
| Protein GI | 91783014 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4965] Flp pilus assembly protein TadB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.136079 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.229715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAGCG CGGTTCTGGT CTTCGCGGCG CTTGCGCTGC TCTGCGCGGC GCTTGCATTG
CTGCTCTGGC AGCGCAGCGC GCAACGCAAA GGCCAGGTGA GCGCGGAACG CTATATCGAC
AGCCGCGTGG CGTCTTCTGG TGGCGGCGCC TTTGGCGTTG CTTCCGCCAT GCCGGCCGGC
GCTGGCGTCG TCGGCGGCGG TGCGGGCAGC GTGGGCAGCG GCCCGGCAAG CGGCGCGCGC
GCCACGCCCG CGCGCGCCGC CACGACGCAC GCCGTGATTG CACCGCAGGC GCCGCCTGCG
GATGCCGGCT GGCTCGCCTA TTGGCGTTAT CTGCAGGCGC GCGCGCGCTT CATGGTGCGG
CATGCGTTGG CGCGTGCGGG CATTGCCAAT GCAAAAGGGC CCGCCGCGCT GGCGGGCACG
CTGGTGTTGC TGCTGTGCGG CTGGGCCGCG CTGGTCGGCG GCGCGCTCGC GGCCGGCGTT
GCGTTGTGCG CCTGCGTGAT GTTCTTCTAT TTTCTGCTGA CGCTGCGCGT GAACAAACGC
CGCCAGCAAA TCGTGCGGCA GTTGCCGCTG TTTCTCGACG GCATCGTGCG TCTGATCACG
CTCGGCAACA GCGTGCCCGC GGCCTTTCAG GCCGCGCTGC AAACGACCGA GGCGCCGTTG
CGCGAATGCC TCGACTACGT GTCGCGGATG CTGCGCACCG GCGTCGAAAT CGACCGTGCG
CTTTCCCAGG TCGCGCTGAT CTACGGCGTG CGCGAACTCG AACTGGTGGG CGCCGTGCTG
CGCCTGTCGG TCAAATACGG CGGCCGCGCC GACGTGATGC TCGAACGGAT GGCTTCGTTC
ATGCGCGACC TCGAACACGC CGAGCGCGAA CTGGTGGCGA TGTCGGCGGA AACGCGGTTG
TCGTCCTGGG TGCTGGCCAT GCTGCCGGTG GGCATCGGCG GTTTTCTGAT CCTCTCCAAT
CCTAAGTATT TCGCTTCGAT GTGGTTCGAT CCGACCGGCC GGCAACTCGT CTATCTGGCG
TTTGCTTTGC AACTGGGTGG GGCATATCTG CTCTATCGCC TTGCGAACCT GAGGAATTGA
|
|---|
| Protein sequence | MSSAVLVFAA LALLCAALAL LLWQRSAQRK GQVSAERYID SRVASSGGGA FGVASAMPAG
AGVVGGGAGS VGSGPASGAR ATPARAATTH AVIAPQAPPA DAGWLAYWRY LQARARFMVR
HALARAGIAN AKGPAALAGT LVLLLCGWAA LVGGALAAGV ALCACVMFFY FLLTLRVNKR
RQQIVRQLPL FLDGIVRLIT LGNSVPAAFQ AALQTTEAPL RECLDYVSRM LRTGVEIDRA
LSQVALIYGV RELELVGAVL RLSVKYGGRA DVMLERMASF MRDLEHAERE LVAMSAETRL
SSWVLAMLPV GIGGFLILSN PKYFASMWFD PTGRQLVYLA FALQLGGAYL LYRLANLRN
|
|---|
| |