| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2794 |
|---|
| Symbol | |
|---|
| ID | 4004980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 1856876 |
|---|
| End bp | 1857889 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637946831 |
|---|
| Product | putative tight adherence TadC related transmembrane protein |
|---|
| Protein accession | YP_558221 |
|---|
| Protein GI | 91783015 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2064] Flp pilus assembly protein TadC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.637104 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.388946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACCC AACAACTCGT CGCGCTCGCG CTCGCTCTGG CCGCGCTCGG TTTGCTGCTG
ATCGCCGGAC TGGTGCTGGC GCGCATGGCC GCCGCGCGGC GCAGCGAACG CACGCTGCGC
CACGCGCTCG ACGAGCGCGC GCTGCAAAGC GCGGCGCTCG CCGCCGCCGC GGCGGCACGC
GGCGCAGAAG GCGCGCAGGG TGGCGCAAAG CGTGCCACGC GGCACGCACC GCCCACGGGT
CTCAAAGGTC TGCTGGAGCG CTTCGCGCAC ACCGGGATTC GCTGGCTCGA CACGCCGTTC
GGCCGCCAGA TCGTCGCCGA AGAAGATCGC CGGCTGCTCG AACAATGCGG TTTCGTGGAT
ACGCGCACGC GCGGCCTCTT TCTGGTGGCG CGGCTCGCAG GTGCGATGGT GTTGCCCGTG
CTGGCCGGCA TGCTTACGCG CGGTCAGTTC GAGGGCTCGC GGTATGTGGC GCTGGTGATC
ATCGCCGCGA TGGCGGGCTT CATGCTGCCG AAATTCGTGC TGCGGCGGCG TGCCGGCAAG
CGCCGCAACG GCGTGGTCGA CGAATTGCCG TTGCTGGTCG ATCTGCTGCG GCTTCTGCAA
GGCGTGGGTT TGTCGCTCGA TCAGAGCTTG CAGGTGGTGG TCAACGACTT TCGCGGCATG
CTGCCGGTGC TCGCCGGCGA GCTGGAAATC GCCCAGCGTC AGTTCACTGC CGGCCGCACG
CGCGAGCAGT CGCTGAACCG GCTCGCAACG AGTTACGACA ACGAGGATCT GCGCGCGGTT
ATGCGTTTGC TGGTGCAGGT GGACCGGCAC GGCGGCGCCG TGCAGGAACC GCTCAAGCAG
TTCGGCGACC GTCTGCGCGA AACGCGCCGC GCAATGTTGC GCGAACGCAT TGGCCGGCTC
GCCGTGAAGA TGACGGGCGT GATGATCGTC ACGTTGCTGC CCGCGTTGAT GATCGTCACG
GCCGGCCCCG GCGTGCTGGC TGTCCAGCAT TCGCTGGGCG CGGCGAAGCA CTGA
|
|---|
| Protein sequence | MQTQQLVALA LALAALGLLL IAGLVLARMA AARRSERTLR HALDERALQS AALAAAAAAR
GAEGAQGGAK RATRHAPPTG LKGLLERFAH TGIRWLDTPF GRQIVAEEDR RLLEQCGFVD
TRTRGLFLVA RLAGAMVLPV LAGMLTRGQF EGSRYVALVI IAAMAGFMLP KFVLRRRAGK
RRNGVVDELP LLVDLLRLLQ GVGLSLDQSL QVVVNDFRGM LPVLAGELEI AQRQFTAGRT
REQSLNRLAT SYDNEDLRAV MRLLVQVDRH GGAVQEPLKQ FGDRLRETRR AMLRERIGRL
AVKMTGVMIV TLLPALMIVT AGPGVLAVQH SLGAAKH
|
|---|
| |