Gene Bxe_A2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A2790 
Symbol 
ID4004984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp1861002 
End bp1862393 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content65% 
IMG OID637946835 
Productsigma-54 dependent trancsriptional regulator 
Protein accessionYP_558225 
Protein GI91783019 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.153211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.129161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCA CCACCAAAAT CGAGGAACTC GATATCTACG TCTGGGAGGG CAAGGCCGAC 
ATCGTCGACC GGGTCGCGCG CTGCATGGCG AGCTTCGACG TCGAAGTGAT CCGTGCTGAC
GATATCGCGA TCTCGCCCGA GCGGACCGCG CTGCGGCCGT CGCTCGCAAT CATCAGCGTA
TCCGTGATCG ACAGCGGCGC GCTGATCCTG CGCGACTGGC AGGCGGCGCA CGGCATCCCG
GTAGTGTGGG TCGGCGCCGC GCCGCGCGAA CACGATCCGG CCACCTATCC GTCCGAGTAC
TCGCATATCC TGCCGCTCGA CTTCACCTGC GCCGAATTGC GTGGCATGGT CATGAAGCTC
GTGCTGCAAA TGCGCGCGCA CAGCGCGAAG ACGCACGAGT CCGACGCGAT GATCGCCAAC
TCGGAGTGCA TGCAGGCGCT GCTGCACGAA GTCGACACCT TCGCCGATTG CGACACCAGT
GTGCTGGTGC ATGGCGAAAC CGGCGTCGGC AAGGAGCGCA TCGCGCAACT GCTGCACGAA
AAACATAGCC GCTACGGGCA AGGCCCGTTC GTCGCGGTGA ACTGCGGCGC GATTCCGGAC
GGGCTGTTCG AGTCGCTGTT CTTCGGTCAC TCGAAAGGCT CGTTCACCGG CGCGGTGGTC
GCGCACAAAG GCTACTTCGA GCAGGCCGAC GGCGGCACGC TGTTCCTCGA CGAAATCGGC
GATCTGCCGC TCTATCAGCA GGTCAAGCTG CTGCGCGTGC TCGAAGACAG CGCGGTGACG
CGCATTGGTT CGGCGACGCC GGTGAAGCTC GACTTCCGGC TGGTGGCGGC GACCAACAAA
CTGCTGCCGC AACTGGTGAA AGACGGCACG TTTCGCGCCG ACCTCTACTA CCGGCTTGCC
GTGATCGAGT TGAAAATTCC GTCACTGGAA GAGCGGGGCG CCGTCGACAA GATCGCCATC
TTCAAGGCGT TCATTGCGCA GATCGTCGGC ACCGAGCGTC TCGCCGCGCT GCCCGACCTG
CCGTACTGGC TCGCCGACGC CGTCGCGGAC ACCTACTTCC CCGGCAACGT GCGCGAACTG
CGCAACCTGG CCGAACGCAT CGGCGTGACC GTGCGCCAGA TCGGTGCGTG GGACGCGGCG
CGCCTGCAAC GCCTGCTCGC GCTCGCGCGC ACCAGTCAGC CGGTGCCGGC CGAAAGCGTC
GCCGAGGTGC TGGTGGACCG CAGCAAGTGG GACATGGCCG AACGCAACCG CGTGCTGGCC
GCGCTCGACG CAAACGGTTG GCGGCGCCAG GATACCGCGC TCTACCTGGG CATCAGCCGC
AAGGTTCTGT GGGAGAAGAT GCGCAAATAC CAAATTTTCG ACGAAGAGCC CGAAACACGC
GAAAGTGAGT AA
 
Protein sequence
MRTTTKIEEL DIYVWEGKAD IVDRVARCMA SFDVEVIRAD DIAISPERTA LRPSLAIISV 
SVIDSGALIL RDWQAAHGIP VVWVGAAPRE HDPATYPSEY SHILPLDFTC AELRGMVMKL
VLQMRAHSAK THESDAMIAN SECMQALLHE VDTFADCDTS VLVHGETGVG KERIAQLLHE
KHSRYGQGPF VAVNCGAIPD GLFESLFFGH SKGSFTGAVV AHKGYFEQAD GGTLFLDEIG
DLPLYQQVKL LRVLEDSAVT RIGSATPVKL DFRLVAATNK LLPQLVKDGT FRADLYYRLA
VIELKIPSLE ERGAVDKIAI FKAFIAQIVG TERLAALPDL PYWLADAVAD TYFPGNVREL
RNLAERIGVT VRQIGAWDAA RLQRLLALAR TSQPVPAESV AEVLVDRSKW DMAERNRVLA
ALDANGWRRQ DTALYLGISR KVLWEKMRKY QIFDEEPETR ESE