| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2789 |
|---|
| Symbol | |
|---|
| ID | 4004985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 1862441 |
|---|
| End bp | 1863169 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637946836 |
|---|
| Product | putative signal peptide protein |
|---|
| Protein accession | YP_558226 |
|---|
| Protein GI | 91783020 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0031715 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.186285 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGAA AGTCGAAACT ACGACAGATT GCCTTCGCCG CAGTCATCGC GATCGGGGCA
GCGCAGGGCG TGAATGCGCA GTCTCTGCCG GACAGCAGCG CGGGTGCTGG CGCCGGGGGC
GGCGTTGTTT CCCAGCCGGG CGCGACGGTG GCGTTGCCGG CAACGCCACC GGCAGGACAG
GCTCAGACGT CGGCGCTCAC GCCCGACGAA GCGAAGCAGT CCGCCGCGGG CAATGTGGCG
GAATTGCAGC AGATGATCCA CGGCTCGGAT CTGAGCGAAT TGCGCACCAC CTATAACGGT
AGCTACGGCG CGAGCTTGCT GTTTTACGGC AAGGAGATGA CGTACTACGT GGCGCTGTTC
CAGCAGAAAA ATTTCTGGCG TGTCATCAAG ACCCAGGACG CCGCGCGTGC CGACATGATC
TACAAGGATT TCGTGCGTCA GACGGTGCAG CTGTCGGACG TCGAGATTCG CCGCACGCAG
CTCGAGGCGC AGAAAGCGTT TACGGAGCGG ATGATCGCGT TGTCGCAAGA CCGCGCGAAC
CGTCTGCAGG CCGATCTGGA TGTGGCGCGC CAGCAGCAGA CCATCGTGGC GAGCCAGCAG
CAGCAGACCC GCGCCGAAGC TACGGCGCTC GCTCAGCAGA AGGCTTCCGC GCAAGATCAG
TTGCGTGCCG CGCAGCGTCA GGTGCGTGAA CTGCAGCGCC AGCTGGAAAG CGGCTTGCCC
TCGCACTGA
|
|---|
| Protein sequence | MDRKSKLRQI AFAAVIAIGA AQGVNAQSLP DSSAGAGAGG GVVSQPGATV ALPATPPAGQ
AQTSALTPDE AKQSAAGNVA ELQQMIHGSD LSELRTTYNG SYGASLLFYG KEMTYYVALF
QQKNFWRVIK TQDAARADMI YKDFVRQTVQ LSDVEIRRTQ LEAQKAFTER MIALSQDRAN
RLQADLDVAR QQQTIVASQQ QQTRAEATAL AQQKASAQDQ LRAAQRQVRE LQRQLESGLP
SH
|
|---|
| |