| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2725 |
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| Symbol | |
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| ID | 4005085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 1930860 |
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| End bp | 1932155 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637946901 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_558291 |
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| Protein GI | 91783085 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00241736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0920445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTACG AATACATGAC CGGTTTCGCG AACGAATTTG CGACCGAAAC GCTGCCCGGC
GCCCTCCCCG AAAGTCGGAA CTCGCCGCAG CGCGCGCCTT ATGGCCTCTA TGCAGAGCAG
TTTTCGGGCA CGGCCTTCAC GGCACCGCGC CACAGCAACC GCCGCTCGTG GCTCTACCGG
ATCCGCCCGG CCGCCGTGCA CGAGCCGTTC GCGCCGCTTG TCAACACGCG CCTGCTGTCG
CGCTTCGACG AGGTGCCGCC GCCGCCGAAC CAGCTGCGCT GGAATCCACT GCCTTACCCC
GACACGCCGC TTGACTTCAT CGACGGCCTC GTCACGATGG CTGGCAACGG CTCGCCCGAG
GCCGGCACCG GCTGTGGCAT CCATCTCTAC ACGGCCACCC GTTCGATGCA GGGCCGCTTC
TTCTACGACG CCGACGGCGA GCTGCTGATC GTGCCGCAGG AAGGTCGCCT GCTGATCTCG
ACCGAACTTG GCGCGCTCGA GGTGGAACCG CAGGAGATCG TCGTAATTCC GCGCGGCGTG
CGCTTCAAGG TCGAGCTGCC CGACCACCGC GCGCGCGGTT ACGTTTGCGA GAACTACGGC
GCCCTCTTCA AGCTGCCTGA CCTCGGCGTG ATCGGCTCGA ACGGCCTCGC GAACCCGCGC
GACTTTCAGA CGCCGGTCGC GCGCTATGAG GACGTCGAAG GTGATTTCGA GCTTGTCGCG
AAGTTCCAGG GCAACCTATG GACAACCCGC ATCGGCCACT CGCCGCTTGA TGTGGTTGCC
TGGCACGGCA ACTACGCGCC CTACAAGTAC GATCTGCGCC GCTTCAACAC GATTGGCTCG
ATCAGCTACG ACCATCCTGA TCCGTCGATT TTCCTCGTGC TGCAGGCGCC GAGCGATACG
CCGGGCGTCG ACACGGTCGA CTTCGTGATC TTTCCGCCGC GATGGCTCGC GGCCGAGAAT
ACATTCCGCC CGCCGTGGTT CCACCGCAAT GTCGCGAGCG AGTTCATGGG ACTGATCTAT
GGCATCTATG ATGCGAAGGC CGAGGGTTTC ACGCCGGGCG GGGCGTCGCT GCACAACTGC
GTGAGCGGCC ACGGCCCCGA TGCCGAGACC TTCGAGAAGG CGAGCGCATC CGATACCACG
ATGCCGCATG CCGTGAAGGA CACGATGGCC TTCATGTTCG AGACGCCGGC CGTGATCCGG
CCGACCCGCC ATGCGCTCGA ATCGGCCCAA CTGCAGCCCG GGTACTACCG CTGCTGGCAG
GGCATCAGGA AGCACTTCAA CCCGTCGCAA GCGTGA
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| Protein sequence | MTYEYMTGFA NEFATETLPG ALPESRNSPQ RAPYGLYAEQ FSGTAFTAPR HSNRRSWLYR
IRPAAVHEPF APLVNTRLLS RFDEVPPPPN QLRWNPLPYP DTPLDFIDGL VTMAGNGSPE
AGTGCGIHLY TATRSMQGRF FYDADGELLI VPQEGRLLIS TELGALEVEP QEIVVIPRGV
RFKVELPDHR ARGYVCENYG ALFKLPDLGV IGSNGLANPR DFQTPVARYE DVEGDFELVA
KFQGNLWTTR IGHSPLDVVA WHGNYAPYKY DLRRFNTIGS ISYDHPDPSI FLVLQAPSDT
PGVDTVDFVI FPPRWLAAEN TFRPPWFHRN VASEFMGLIY GIYDAKAEGF TPGGASLHNC
VSGHGPDAET FEKASASDTT MPHAVKDTMA FMFETPAVIR PTRHALESAQ LQPGYYRCWQ
GIRKHFNPSQ A
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