| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2672 |
|---|
| Symbol | |
|---|
| ID | 4005468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 1981587 |
|---|
| End bp | 1982240 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637946951 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_558341 |
|---|
| Protein GI | 91783135 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGACTGC GCGAACTAAA GAAAGATCGG ACCAGGACTC AGCTCCTTGA GGCGGCGCTG
GAACTCATTG CGCGCCAGGG GTTCGAGCAG ACAACCATCA GCGAGATTGC CGATGCTGTT
CAGGTTTCAC CGAGGACGCT GCTGAGATAC TTTCCAACGA AAGAGGATGT AATCGTCAGT
TGGGTCGATC AGGGGATGTC CATCCTCCGG GAGAGTCTCG GAGCGCGCCC GCCGGGCGAA
ACCGATGCTG AAGCGCTGGT AGCTGCCGCG CGTGAAATGC TGACTGCCTA TGAGGCCCGA
TCGACGTTCT TCCTTGTGAT CGAACGCACT ATTGCAGCCT CGCCGGGTAT TTCCGCTCGC
AAGCAGCAGA TGATGGAGGG TCTGGCGCGC GACATCTGCG CGCTTTTGGT TAAACGCCCA
GCGGCTAGCA TCTCATCGGC CCTCATTCGT GATGTCTATG TAGGAACCGT ATTTGCCGCC
ATCCACGCAG CCATACAGGC GTGGGTTGCA ACGAACGGTA GCCAGTCGTT GATCGGTCTC
TTTGACGAAG CCACCGCCGT TGTGAAATTT GTCGAGCCAT CCGGTGCTGA CCGTAGAAAA
CAAGGCGCCA ATGCTCGTAA CCAGACTGGT CGTGTCCGCC CTGTTGGACG CTAG
|
|---|
| Protein sequence | MGLRELKKDR TRTQLLEAAL ELIARQGFEQ TTISEIADAV QVSPRTLLRY FPTKEDVIVS
WVDQGMSILR ESLGARPPGE TDAEALVAAA REMLTAYEAR STFFLVIERT IAASPGISAR
KQQMMEGLAR DICALLVKRP AASISSALIR DVYVGTVFAA IHAAIQAWVA TNGSQSLIGL
FDEATAVVKF VEPSGADRRK QGANARNQTG RVRPVGR
|
|---|
| |