Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A2658 |
Symbol | |
ID | 4005579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 1993626 |
End bp | 1994279 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637946963 |
Product | putative conjugal transfer protein, VirB1/TraA like |
Protein accession | YP_558353 |
Protein GI | 91783147 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.775372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCGT TTGACTTCGT TCCGCTCGCG CAGCAGTGCG CGCCCCAGGT CTCGCTGTTG ACGATGGCAG CGATCGTTCG GACCGAATCG GGTTTCAACC CGTACGCGAT TGGCGTGGTG CATGGCCGGC TGGTGCGTCA GCCGACGAGC GAAGCTGAGG CGGTGGCGAC GGTACATGCA CTGGACGCCG GTGGCTGGAA CTTCAGCGTC GGACTCGCAC AGGTGAACCG CGCAAACTGG CCCACCTATG GATTGAATGA GCAAAATGCA TTTGATCCAT GTCGCAATCT GGCCGTGGGC GCGGCGATCC TGCAGGGTTG TTTCGAACTG GCGCGGCAGG CACGAGCGCA TGCATCGAAC GATTCGCAAT CCGCCCTGCG CGCGAGCCTG TCGTGCTATG CCAGCGGGGA CTTCTCGACG GGATATCGGA CCGGGTACGT GCGGCGCGTA GTCAGCAACG CCAGTGTCCT TGCACCTTCA TCGGAACCCG TTGTCGTTCC GCCCATTGCT CCGATTCCTG TTGTGCCGGT GGGTTCTGAT GCTTCAGACC CGCCGGGGCG ATCCCGACCG GAAAGGCATC CGGTATCGGA GCCGGCAGAT CCGTCAACCG GCAACTCCAC GCGGGACCCG AACGATAGCG CAGTGGTGTT CTAG
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Protein sequence | MLPFDFVPLA QQCAPQVSLL TMAAIVRTES GFNPYAIGVV HGRLVRQPTS EAEAVATVHA LDAGGWNFSV GLAQVNRANW PTYGLNEQNA FDPCRNLAVG AAILQGCFEL ARQARAHASN DSQSALRASL SCYASGDFST GYRTGYVRRV VSNASVLAPS SEPVVVPPIA PIPVVPVGSD ASDPPGRSRP ERHPVSEPAD PSTGNSTRDP NDSAVVF
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