Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A2653 |
Symbol | |
ID | 4005584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 1998662 |
End bp | 1999375 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637946968 |
Product | putative type IV secretion system protein VirB5/TraF |
Protein accession | YP_558358 |
Protein GI | 91783152 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02791] P-type DNA transfer protein VirB5 |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0243741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGGAC GAAACAGATG GGTAGGTGCC GCATTGGTGT CGGCGGTATC AGTGGTATCG GCAGCATGGT GTGCCGGTGC TCACGCGCAA GGTATCCCGG TCTTTGACGC TCAGAACGTT GTGCAGGCCA TTGCTACGGT GGCCCAACTG GAGCAGGAAG TGCAGCAGGA AATCCAGATC TATCAGTCGA CGGTTGGCAC GCGCGGCTTC GGTGCGCTCC TGAGCAACCC GGTCGTCGCA AACTCCCTGC CGTCGAACTG GCAGAGCGTC TATACGGCGA TCCAGAACGG CGGCTATTCG GGCCTGACGG GCAGTGCCCA GGCTCTGCGC TCGGCCAGCC AGATCTATAA CTGCGAGGAC CAGACCGGGA TCGATCAGCA GGTGTGCCAG CGTGCGCTCA ACAAGCCTTA CCAGGACAAG GCGTTTGGCC AGCAGGCCTA CCAGACCGAG TTGCAGGAGC TGAACCAGAT CCAGAGTCTG GCGCAACAGA TCGATGTGAC CCAAGACCCG AAGGGCGTCG CCGAGCTGCA GGCGCGCATC CAGGCGGAGA GCACGACGGT CGGCAACGAG ATGACTAAGC TGCAGCTCTT CCGGATGCTG GCCGACGCCG AGGACAAGCT CGTGGCAGAG CAGCAGAGCG AGCTGGTGCT GAGCCGGGCG GGCAAGACCA ATAGGCTGCA GGACCAGATG GTCCCGGCGT CGTTCAGAAA CTGA
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Protein sequence | MNGRNRWVGA ALVSAVSVVS AAWCAGAHAQ GIPVFDAQNV VQAIATVAQL EQEVQQEIQI YQSTVGTRGF GALLSNPVVA NSLPSNWQSV YTAIQNGGYS GLTGSAQALR SASQIYNCED QTGIDQQVCQ RALNKPYQDK AFGQQAYQTE LQELNQIQSL AQQIDVTQDP KGVAELQARI QAESTTVGNE MTKLQLFRML ADAEDKLVAE QQSELVLSRA GKTNRLQDQM VPASFRN
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