Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A2458 |
Symbol | |
ID | 4003592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 2206263 |
End bp | 2207000 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637947182 |
Product | RNA polymerase sigma factor |
Protein accession | YP_558567 |
Protein GI | 91783361 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0973834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.21204 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCCAGA CCGATTCTGA ACCTGTTCGC GCGCACGGCG AGACCGACGC GGCGAGGAGC CGGCGCTTTC AGCAGATGGC GCTGCCGCAC CTCGACGCCG CGTACAACCT CGCGCGCTGG TTGTGCGGCA ACGCCAATGA TGCCGACGAC GTCGTGCAGG AAGCCTTCAT GCGCGCGTTT CGCTTCTTCG ACACCTTTCG CGGCGACTCG GCCCGGCCGT GGCTGCTGGC GATCGTGCGC CGCACCTGGT ACACGGAATG GCGGCGGCGG GCCTCGTCGC ACGAAACGGT GGAGTTCGAC GACACGATGG ACGACGCGTC CTTCGACGGC TGGACGGTGG GCGGCGCCGA CCCGCAGGCG CTCCTGATCC GCGACGAGGA TACGAAGCTG GTACACGAGG CGCTCGCGCA GTTGCCGGTC GAATATCGGG AAGTGCTGAT GCTGAGGGAA CTGGAGGAAA TGGGTTATCG GGAGATCGCG CTGGTGGCGG ACGTGCCGAT CGGCACGGTG ATGTCCCGGC TCGCGCGGGG ACGCCGCAAG CTGGCCGCGG TGCTGACGGA GAAGCAGGGC GGCGCGACGG CGCCGCCCAG ACCGTCGATG TGCGCGGCGG CGCCCGGCGC AAGCAAATCG GCCACGGCGA GCGTGACGCC CCTGCGGGCG TCCGCCAACG GCCGGCCACT CAACACGCCG GGCGGCAGCG CCGCCGGCAA CGCTCAGGAG ACGCCAGATG GACTGTAA
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Protein sequence | MVQTDSEPVR AHGETDAARS RRFQQMALPH LDAAYNLARW LCGNANDADD VVQEAFMRAF RFFDTFRGDS ARPWLLAIVR RTWYTEWRRR ASSHETVEFD DTMDDASFDG WTVGGADPQA LLIRDEDTKL VHEALAQLPV EYREVLMLRE LEEMGYREIA LVADVPIGTV MSRLARGRRK LAAVLTEKQG GATAPPRPSM CAAAPGASKS ATASVTPLRA SANGRPLNTP GGSAAGNAQE TPDGL
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