Gene Bxe_A2365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A2365 
Symbol 
ID4004954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp2292256 
End bp2293812 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content63% 
IMG OID637947273 
Productmajor facilitator superfamily multidrug efflux transporter 
Protein accessionYP_558657 
Protein GI91783451 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00539088 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.199089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGG CGTCGTCCCG CGTGCCGTTG TTCAGCGTCG AAAAACTACG CGGCGACTTT 
TTCCCGTGGG TGCTGGCCGT CGTCACCGGC CTCGACTATT TCGACAATTC GATCTTCTCG
TTTTTCACCA GCTATATCGC GGGCGGCATC AACGCGTCGC CCGATGAACT GGTGTGGGCG
TCGAGCGCCT ATGCGGTCGC GGCCGTGCTG GGCATCCTGC AGCAACAATG GTGGGTCGAG
CGCTTCGGCT ACCGGCGCTA CGTGGCCGGC TGCATGCTGC TTTATTCAGT CGGCTCGATG
GCCGCGGCGC TATGCGAATC GTCGATCGAA CTGGCGTTCG CGCGCGGCTT TCAGGGTTAC
TTCATCGGCC CGATGATGGG CACCTGCCGC ATCCTGATCC AGATGAGTTT CAAGCCGCAG
CAGCGGCCCG CGGCCACCCG CGCGTTTCTC GTGCTGATCG TCCTGAGCAG TGCGCTCGCG
CCGCTGATCG GCGGCCAGCT GGTCGCATAT TTCGACTGGC GCGCGCTGTT CGCATGCACC
GCGCCCGTGG GCATGCTGTT CGCCGTGCTG GCCTTGCTCG CGCTGCCCGA CTCGGGCAAT
CGCCTGCCCG AAGAACGCGG CTCCGCACAT TTCTGGCCAT ATCTCATCTT CGCTTTCGCC
CAAGGCGCCC TGCAAATCGT CATGCAGCAG GTGCGCTTCC AGCTGTTCAG CGCGTCACCC
GGACTGATTC TGCTGACACT CGCCGGCATC GCTGCGCTGG GCTGGTTCGC CTATCATCAG
TGGCATCATC CCGCGCCGCT CGTACGCCTC AATGCGCTGC GCGAAAAGGT GTTCCAGGCC
GGGCTCGTGC TCTACATGTT CTACTACTAC ATCTCGACCG TGTTCAGCTA TCTGATCTCG
CGCTTTCTCG AAGGCGGTCT TGGCTATCCG GTCGAAAACA CCGGGCAACT GGTCGGCGTG
ACGTCGCTGA TTTCCGCGAG CGCGCTGTTC GTCTACCTGC GTTACGCGAA GCTGCTGCCG
CGCAAGAAGT GGATCATCGT GCCGGGTTTC GCCGTGGCCG CGTTCGCCGC GGCGTGGATG
ACGCGCATGT CGCCCGGCGT CGGCGAGGCG GCGTTGATGC TGCCCCTGCT GCTGCGCGGC
CTGCTGTTGC TGTTCATCGT GCTGCCGGTG GCCAATCTCA CTTTCAGGAT CTTCGCCATC
GAAGAATTCA CGCACGGCTA CCGGCTGAAA AACATCGTGC GGCAGGTGAC GATCTCGTTC
GCGACGGCCT CCGTGATCAT CGTCGAGCAG CATCGGCAGG CGCTGCATCA AACCCGCCTC
GCGGAGTTCG TGAATCCGTA CAATCCGGTG TTCCAGAATT CGCTCGCCAC GCTGGCGCGA
GGCTTCGCCG CCGCGGGTCG CTCACCGTCC GAGGCGCACT CGCTGGCGCT CGTGGAAATC
AGCCGCGCGG TCGCGCAACA GGCCAGCTTC CTCGCCTCGC TGGACGGCTT CTATTTCCTG
GCCGGCGTGG CGATATGCGG CGGCATTTTC GCCGCGTGGC AAAAACAGAT CGACTAA
 
Protein sequence
MSTASSRVPL FSVEKLRGDF FPWVLAVVTG LDYFDNSIFS FFTSYIAGGI NASPDELVWA 
SSAYAVAAVL GILQQQWWVE RFGYRRYVAG CMLLYSVGSM AAALCESSIE LAFARGFQGY
FIGPMMGTCR ILIQMSFKPQ QRPAATRAFL VLIVLSSALA PLIGGQLVAY FDWRALFACT
APVGMLFAVL ALLALPDSGN RLPEERGSAH FWPYLIFAFA QGALQIVMQQ VRFQLFSASP
GLILLTLAGI AALGWFAYHQ WHHPAPLVRL NALREKVFQA GLVLYMFYYY ISTVFSYLIS
RFLEGGLGYP VENTGQLVGV TSLISASALF VYLRYAKLLP RKKWIIVPGF AVAAFAAAWM
TRMSPGVGEA ALMLPLLLRG LLLLFIVLPV ANLTFRIFAI EEFTHGYRLK NIVRQVTISF
ATASVIIVEQ HRQALHQTRL AEFVNPYNPV FQNSLATLAR GFAAAGRSPS EAHSLALVEI
SRAVAQQASF LASLDGFYFL AGVAICGGIF AAWQKQID