Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A2365 |
Symbol | |
ID | 4004954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 2292256 |
End bp | 2293812 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637947273 |
Product | major facilitator superfamily multidrug efflux transporter |
Protein accession | YP_558657 |
Protein GI | 91783451 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00539088 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.199089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGG CGTCGTCCCG CGTGCCGTTG TTCAGCGTCG AAAAACTACG CGGCGACTTT TTCCCGTGGG TGCTGGCCGT CGTCACCGGC CTCGACTATT TCGACAATTC GATCTTCTCG TTTTTCACCA GCTATATCGC GGGCGGCATC AACGCGTCGC CCGATGAACT GGTGTGGGCG TCGAGCGCCT ATGCGGTCGC GGCCGTGCTG GGCATCCTGC AGCAACAATG GTGGGTCGAG CGCTTCGGCT ACCGGCGCTA CGTGGCCGGC TGCATGCTGC TTTATTCAGT CGGCTCGATG GCCGCGGCGC TATGCGAATC GTCGATCGAA CTGGCGTTCG CGCGCGGCTT TCAGGGTTAC TTCATCGGCC CGATGATGGG CACCTGCCGC ATCCTGATCC AGATGAGTTT CAAGCCGCAG CAGCGGCCCG CGGCCACCCG CGCGTTTCTC GTGCTGATCG TCCTGAGCAG TGCGCTCGCG CCGCTGATCG GCGGCCAGCT GGTCGCATAT TTCGACTGGC GCGCGCTGTT CGCATGCACC GCGCCCGTGG GCATGCTGTT CGCCGTGCTG GCCTTGCTCG CGCTGCCCGA CTCGGGCAAT CGCCTGCCCG AAGAACGCGG CTCCGCACAT TTCTGGCCAT ATCTCATCTT CGCTTTCGCC CAAGGCGCCC TGCAAATCGT CATGCAGCAG GTGCGCTTCC AGCTGTTCAG CGCGTCACCC GGACTGATTC TGCTGACACT CGCCGGCATC GCTGCGCTGG GCTGGTTCGC CTATCATCAG TGGCATCATC CCGCGCCGCT CGTACGCCTC AATGCGCTGC GCGAAAAGGT GTTCCAGGCC GGGCTCGTGC TCTACATGTT CTACTACTAC ATCTCGACCG TGTTCAGCTA TCTGATCTCG CGCTTTCTCG AAGGCGGTCT TGGCTATCCG GTCGAAAACA CCGGGCAACT GGTCGGCGTG ACGTCGCTGA TTTCCGCGAG CGCGCTGTTC GTCTACCTGC GTTACGCGAA GCTGCTGCCG CGCAAGAAGT GGATCATCGT GCCGGGTTTC GCCGTGGCCG CGTTCGCCGC GGCGTGGATG ACGCGCATGT CGCCCGGCGT CGGCGAGGCG GCGTTGATGC TGCCCCTGCT GCTGCGCGGC CTGCTGTTGC TGTTCATCGT GCTGCCGGTG GCCAATCTCA CTTTCAGGAT CTTCGCCATC GAAGAATTCA CGCACGGCTA CCGGCTGAAA AACATCGTGC GGCAGGTGAC GATCTCGTTC GCGACGGCCT CCGTGATCAT CGTCGAGCAG CATCGGCAGG CGCTGCATCA AACCCGCCTC GCGGAGTTCG TGAATCCGTA CAATCCGGTG TTCCAGAATT CGCTCGCCAC GCTGGCGCGA GGCTTCGCCG CCGCGGGTCG CTCACCGTCC GAGGCGCACT CGCTGGCGCT CGTGGAAATC AGCCGCGCGG TCGCGCAACA GGCCAGCTTC CTCGCCTCGC TGGACGGCTT CTATTTCCTG GCCGGCGTGG CGATATGCGG CGGCATTTTC GCCGCGTGGC AAAAACAGAT CGACTAA
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Protein sequence | MSTASSRVPL FSVEKLRGDF FPWVLAVVTG LDYFDNSIFS FFTSYIAGGI NASPDELVWA SSAYAVAAVL GILQQQWWVE RFGYRRYVAG CMLLYSVGSM AAALCESSIE LAFARGFQGY FIGPMMGTCR ILIQMSFKPQ QRPAATRAFL VLIVLSSALA PLIGGQLVAY FDWRALFACT APVGMLFAVL ALLALPDSGN RLPEERGSAH FWPYLIFAFA QGALQIVMQQ VRFQLFSASP GLILLTLAGI AALGWFAYHQ WHHPAPLVRL NALREKVFQA GLVLYMFYYY ISTVFSYLIS RFLEGGLGYP VENTGQLVGV TSLISASALF VYLRYAKLLP RKKWIIVPGF AVAAFAAAWM TRMSPGVGEA ALMLPLLLRG LLLLFIVLPV ANLTFRIFAI EEFTHGYRLK NIVRQVTISF ATASVIIVEQ HRQALHQTRL AEFVNPYNPV FQNSLATLAR GFAAAGRSPS EAHSLALVEI SRAVAQQASF LASLDGFYFL AGVAICGGIF AAWQKQID
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