| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2338 |
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| Symbol | |
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| ID | 4004651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 2323292 |
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| End bp | 2324314 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637947300 |
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| Product | putative tRNA-dihydrouridine synthase C, DuS |
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| Protein accession | YP_558684 |
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| Protein GI | 91783478 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.135158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.172582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCA TCTATCTCGC CCCAATGGAA GGCCTCGCCG ACTACGTATT GCGCGACGTG
CTGACCGGCA TCGGCGGATT CGATGGATGC GTGTCCGAGT TCGTCCGCGT GACGGGCTCC
CTGCTGCCCA GCCGAGTCTA CGAAAGAGAA GCGCCCGAAG TGCTCGACGG AGGTCACACG
CCCAATGGCA CGCCGATGGT GATCCAGCTG CTCGGCAGCG ATCCCGAATG GATGGCGCGG
AATGCCGCCC ACGCGGCCAG CCTGTCGCCG CATGGAATCG ACCTGAACTT CGGATGTCCC
GCCAAGGTCG TCAATCAGCA CGGCGGCGGC GCCATGTTGC TGGCCGACCC TGAACAACTG
AACCGGATCG TGTCGTCGGT ACGGGCCGCC GTGCCCGCCG GTGTCCCCGT GACGGCAAAA
ATGCGCCTTG GCGTGTCCGA CACGTCGCTG GCGATCGAAT GCGCAGTCGC GCTCGCGGAA
GGCGGCGCCG CCTCGCTCGT CGTGCACGCC AGAACGCGCG ATCACGGCTA CCGGCCGCCG
GCCCACTGGG AGTGGATCGC GCGGATCGAT GCCGCCGTGG ACGTGCCGGT CGTCGCGAAC
GGCGAGGTAT GGACGGTGGC CGACTGGGAG CGCTGCCGCG CGGTCAGCGG CTGCGCGAAC
GTCATGCTCG GGCGGGGCGC CGTGTCGGAC CCGTTCCTGG CACTGAGAAT ACGCGGCCTG
ATGGAGCGGA CCCCGTCCCA CGGGGAATGG CGGCACGTGC TGGGCCACAT CGCCGGTTAT
CTGAGGAAAT TGCAGACGCG CGTCGCATCG CGTCATGAGC ACGGGCGGGT CAAAAAGTGG
CTCAGCTACC TGCAGCGCAC CTGGCCGCAG GCGGCCGAGC TGCATGCGGC GATCCGCCGG
GTGCAGGATT CGCACGAAAT TCTGGCGATG ATCGAACGCG CATTGGGATT CGATGAATTA
ATGGCGACGC ATCGATTCGC GTCCGCCAGT CAACTCGACG TAGCGGACCT CGCAGCCGGT
TGA
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| Protein sequence | MSRIYLAPME GLADYVLRDV LTGIGGFDGC VSEFVRVTGS LLPSRVYERE APEVLDGGHT
PNGTPMVIQL LGSDPEWMAR NAAHAASLSP HGIDLNFGCP AKVVNQHGGG AMLLADPEQL
NRIVSSVRAA VPAGVPVTAK MRLGVSDTSL AIECAVALAE GGAASLVVHA RTRDHGYRPP
AHWEWIARID AAVDVPVVAN GEVWTVADWE RCRAVSGCAN VMLGRGAVSD PFLALRIRGL
MERTPSHGEW RHVLGHIAGY LRKLQTRVAS RHEHGRVKKW LSYLQRTWPQ AAELHAAIRR
VQDSHEILAM IERALGFDEL MATHRFASAS QLDVADLAAG
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