| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2260 |
|---|
| Symbol | |
|---|
| ID | 4003624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 2416501 |
|---|
| End bp | 2417292 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637947380 |
|---|
| Product | TatD-related deoxyribonuclease |
|---|
| Protein accession | YP_558761 |
|---|
| Protein GI | 91783555 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0084] Mg-dependent DNase |
|---|
| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.225663 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.492402 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGTCG ATTCGCATTG CCATATCAAC TTCGAAGGAC TCGCCGAGCG CTTGCCGCAG
GTGCTCGAAA ACATGCGCAG CCATTCGGTC ACGCATGCGC TGTGCGTGTC CGTCGATCTG
GAGACGCTGC CTGCCGTGCT GGATATCGCC AGCCGGTACG AGAACGTGTA CGCGTCGGTC
GGCGTGCATC CGGATCACGA GCACATGCGC GAGCCGAGCG TCGCCGAACT GGTCGAACTG
GCCGCGCATC CCAAGGTGGT CGCGATCGGC GAGACCGGTC TCGACTACTA CCGGCTGGAA
GGCCGCACGA TCGCCGACAT GGAATGGCAG CGCGAGCGCT TTCGCAACCA TATCCGGGCG
GCGCATGCCA CGCACAAGCC GCTGATCATC CATACGCGTT CGTCGTCGGC AGACACGCTG
CGCATCATGG CCGAGGAGCG CGCGAGCGAG CCGGGCGGCG TGATGCATTG CTTCACCGAA
CCGTGGCCGG TCGCCGAACA GGCGCTGGCG CAGAATTTTT ACATCTCGCT GTCGGGCATC
GTCACATTCA AAAGCGCGAC CGACGTGCAG GACGTCGCGC GCCGCGTGCC GCTCGAGCGT
TTGCTGATCG AAACCGACTC GCCGTACCTC GCGCCCGTGC CGTATCGCGG CAAGCCTAAT
GAACCTGCCT ACGTAAGTTA TGTCGGACGG TTCATCGCGC AGCAACGCGA GATGCCCGAA
GCGGCGCTGG CCGCCGCGAC CACGCAGAAC TTCTTCCGCC TTTTCAAGAT CCCGGCGCCC
ACTGGCGCGT GA
|
|---|
| Protein sequence | MFVDSHCHIN FEGLAERLPQ VLENMRSHSV THALCVSVDL ETLPAVLDIA SRYENVYASV
GVHPDHEHMR EPSVAELVEL AAHPKVVAIG ETGLDYYRLE GRTIADMEWQ RERFRNHIRA
AHATHKPLII HTRSSSADTL RIMAEERASE PGGVMHCFTE PWPVAEQALA QNFYISLSGI
VTFKSATDVQ DVARRVPLER LLIETDSPYL APVPYRGKPN EPAYVSYVGR FIAQQREMPE
AALAAATTQN FFRLFKIPAP TGA
|
|---|
| |