| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2234 |
|---|
| Symbol | |
|---|
| ID | 4003110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 2445609 |
|---|
| End bp | 2446652 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637947406 |
|---|
| Product | GDP-mannose 4,6-dehydratase |
|---|
| Protein accession | YP_558787 |
|---|
| Protein GI | 91783581 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1089] GDP-D-mannose dehydratase |
|---|
| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.666066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.301311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAC CACGCAAAGC GATCATCACC GGCGTATCCG GACAGGACGG CGCCTATCTG
ACCAAACTGC TGCTCGACAA GGGCTACCAC GTGACCGGCA CCTACCGGCG CACGAGTTCC
GTCAATTTCT GGCGTATGCG TGAGCTGGGT GTGCTCGATC ATCCGAATCT GCGTCTGGTC
GAACACGATC TCACCGATCT CGGTTCGACG CTGCGGCTGC TCGAAGGCGC GCAGGCCGAC
GAGTTGTACA ACCTCGCCGC GCAAAGCTTC GTGGGCGTTT CGTTCGACCA GCCGGTGACG
ACCGCCGAAG TAACCGGCAT CGGCGCGCTG AATCTGCTCG AAGGCATCCG CATTCTCAAC
CCGAAGACGC GTTACTACCA GGCGTCCACG TCGGAGATGT TCGGCCTCGT GCAGGCCGTG
CCGCAACGCG AGGACACGCC CTTCTATCCC CGCAGCCCCT ATGGCGTGGC CAAGCTGTTC
GCGCATTGGT CGACGATCAA CTATCGCGAA TCGTATGGGC TCTTTGCGAG CAGCGGGATT
CTGTTCAATC ACGAATCGCC GCTGCGTGGG CGTGAATTCG TCACCCGCAA GATTACCGAC
ACCGTCGCCA AGATCAAGCT CGGCAAGCAG GACGTGCTGG AGCTGGGCAA CATGAGCGCG
CGGCGCGACT GGGGCTTCGC GCTCGAATAC GTGGAAGGCA TGTGGCGCAT GCTGCAAGCC
GATGAGCCGG ACACCTTCGT GCTCGCCACC GGCCGCACCG AAACGGTCCG CGATTTCGTG
CGCATGGCGT TCGCCGCGGC GGGGTATCAG CTCGAATGGT CGGGCAAGGA AGAGCGCGAA
ACGGGTATCG ATGTCGCTAC CGGCAAGACA CTGGTGCGCG TGAATCCGAA GTTCTATCGG
CCGGCCGAAG TGGATCTGCT GATCGGCTGC GCGGACAAGG CTCACGAGAA GCTCGGCTGG
AAACCGGCAA CCACGCTGGA ACAGCTGTGC CACATGATGG TTCATGCGGA TCTGGGGCGC
AACGAGCATC ACGAGACGTT CTGA
|
|---|
| Protein sequence | MSQPRKAIIT GVSGQDGAYL TKLLLDKGYH VTGTYRRTSS VNFWRMRELG VLDHPNLRLV
EHDLTDLGST LRLLEGAQAD ELYNLAAQSF VGVSFDQPVT TAEVTGIGAL NLLEGIRILN
PKTRYYQAST SEMFGLVQAV PQREDTPFYP RSPYGVAKLF AHWSTINYRE SYGLFASSGI
LFNHESPLRG REFVTRKITD TVAKIKLGKQ DVLELGNMSA RRDWGFALEY VEGMWRMLQA
DEPDTFVLAT GRTETVRDFV RMAFAAAGYQ LEWSGKEERE TGIDVATGKT LVRVNPKFYR
PAEVDLLIGC ADKAHEKLGW KPATTLEQLC HMMVHADLGR NEHHETF
|
|---|
| |