| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2108 |
|---|
| Symbol | catB |
|---|
| ID | 4005098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 2600273 |
|---|
| End bp | 2601430 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637947531 |
|---|
| Product | muconate cycloisomerase |
|---|
| Protein accession | YP_558912 |
|---|
| Protein GI | 91783706 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | [TIGR02534] muconate and chloromuconate cycloisomerases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCAA CACCCGTGAA GATCGAGAGC GTGGAGACGA TTCTCGTCGA CGTACCGACG
ATCCGTCCGC ACCGGCTCTC GGTCGCAACG ATGAATTGCC AGACGCTGGT GCTGGTGCGC
ATCCGTTGCG CCGACGGGGT AGTCGGCGTA GGCGAGGGCA CCACCATCGG CGGCCTCGCT
TACGGTGAGG AAAGCCCGGA AAGTATCAAG GTCAACATCG ACACCTATTT CGCGCCGCTG
CTCAAAGGGT TGGACGCAAC GCGTCCGGGC GCCGCGATGG CAAAACTGCG CGAGCTGTTT
CAGGGCAACC GCTTTGCGAA ATCCGCGCTG GAAACGGCGC TGTTCGACGC GCAGGCACAG
CGCCTCGGCG TGCCGCTGTC GGAACTGTTC GGCGGTCGCG TGCGCGATTG CGTGGACGTG
GCGTGGACGC TCGCGAGCGG CGACACGAAG CGCGATATCG ACGAAGCCGG GCAGGTGTAC
GAGACGAAGC GGCATCGGGT ATTCAAGCTG AAGATCGGCT CGCGCGCGCT GGCCGACGAC
GTGGCGCATG TCGTCGCCAT CAGGAAAGCA CTGGAAGGGC GCGGCGAAGT GCGGGTCGAT
GTGAACCAGG CATGGACGGA ATCGGAAACG ATCTGGGCCG CGCGGCGTTT CGCCGATGCC
GGCGTGGCGC TGATCGAGCA GCCCATTGCC GCGGAAAACC GCGCGGGCCT CAAACGTCTG
ACCGACCTCG CTCAAGTGCC GATCATGGCG GACGAGGCGC TGCACGGTCC GGCCGACGCG
TTCGCGATTG CCAGTGCCCG TGCCGCCGAT GTCTTCGCCG TGAAGATCGC GCAATCGGGC
GGCCTCGCGG GCGCGGCGCA GGTGGCGGCC ATCGCCTCGG CCGCGAATAT CGACCTGTAT
GGCGGCACCA TGCTCGAAGG CGCGGTGGGC ACGATGGCTT CGGCGCAACT GTTCAGCACC
TTCGGCGAGC TGAAGTGGGG CACCGAACTG TTCGGCCCGT TGCTGCTGAC CGAAGAAATT
CTCACCGAAC CGCTGCGCTA CGAGAACTTT GCGCTGCACC TGCCTCAAGG TCCGGGTCTT
GGCATCACGC TCGACTGGGA CAAGATCGAC CGCCTGCGAC GCGATACGCG CAAAGGTGCC
AGCGTTACCA CGAACTGA
|
|---|
| Protein sequence | MIATPVKIES VETILVDVPT IRPHRLSVAT MNCQTLVLVR IRCADGVVGV GEGTTIGGLA
YGEESPESIK VNIDTYFAPL LKGLDATRPG AAMAKLRELF QGNRFAKSAL ETALFDAQAQ
RLGVPLSELF GGRVRDCVDV AWTLASGDTK RDIDEAGQVY ETKRHRVFKL KIGSRALADD
VAHVVAIRKA LEGRGEVRVD VNQAWTESET IWAARRFADA GVALIEQPIA AENRAGLKRL
TDLAQVPIMA DEALHGPADA FAIASARAAD VFAVKIAQSG GLAGAAQVAA IASAANIDLY
GGTMLEGAVG TMASAQLFST FGELKWGTEL FGPLLLTEEI LTEPLRYENF ALHLPQGPGL
GITLDWDKID RLRRDTRKGA SVTTN
|
|---|
| |