| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2107 |
|---|
| Symbol | catR |
|---|
| ID | 4005099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 2601535 |
|---|
| End bp | 2602422 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637947532 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_558913 |
|---|
| Protein GI | 91783707 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.329852 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTC GCCAACTCCG CTATTTCATC GCGGTCGCGG AAGAAATGAA CATCACGCGG
GCCGCCAATC GCCTGCACAT GACGCAGCCG CCGCTCAGCC GGCAGATCCA GCAGATCGAA
GAAAACGTCG GCCTGCCGCT GTTCGAACGC GGCTCGCGGC CATTGCGGCT GACCGAAGCC
GGCCGCATTT TCTATGCGCA GGCAAAGCGC CTGATCGATG AAGCGGACGA GCTCGCCCCG
CTCACGCGGC GCCTCGCGCA ACTGGCCGAG CGCGTCGTGA TCGGCTTCGT GCCGTCGACG
CTTTATGGCG CGCTGCCCGC CGTGATCCGT GCGTTTCGTG AAGCCGCGCC GCATATCGAG
CTCTCGCTGA TCGAAATGTT CACGATCGAG CAGCTCGGGG CGCTCAAGGG CGGCCGCATC
GACGTTGGCT TCGGGCGCCT GCGCTTCGAC GACGCGCAAC TCGCGCGCGA AGTCCTCGTC
GAAGAACGGA TGATTGCGGC GCTGCCGCAA GACCATCCGC TGGCGCGCCA GAAGAAGGCG
CTGACATTGG CGGCGCTCGC GCAGGAAACC CTGATCGTCT ATCCGAGCAC GCCGCGGCCG
AGCTATGCCG ACCAGCAGCT ATCGGCCATG CACGATCATG CATTGGAGCC GAAGGCGATC
CATGAAGTGC GGGAATTGCA GACCGCGTTG GGTCTGGTCG CGGCGCAGGT GGGCGTGTGC
CTGGTGCCGG AGAGCGTGGA GGGTTTGCGC GCGCACGGCG TGGTGTACCG GCCGATTCCG
GCGGCCAACG TTGCTTCGCC GATCATCATG AGCCGCCGTT TGCAGGACGA ATCGCCGACC
ACCACGTTGC TCTGTTCGCT CGCACGTGAG CTGTTCAAAC GGGTTTGA
|
|---|
| Protein sequence | MELRQLRYFI AVAEEMNITR AANRLHMTQP PLSRQIQQIE ENVGLPLFER GSRPLRLTEA
GRIFYAQAKR LIDEADELAP LTRRLAQLAE RVVIGFVPST LYGALPAVIR AFREAAPHIE
LSLIEMFTIE QLGALKGGRI DVGFGRLRFD DAQLAREVLV EERMIAALPQ DHPLARQKKA
LTLAALAQET LIVYPSTPRP SYADQQLSAM HDHALEPKAI HEVRELQTAL GLVAAQVGVC
LVPESVEGLR AHGVVYRPIP AANVASPIIM SRRLQDESPT TTLLCSLARE LFKRV
|
|---|
| |