Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A2033 |
Symbol | |
ID | 4003330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 2678370 |
End bp | 2680922 |
Gene Length | 2553 bp |
Protein Length | 850 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637947604 |
Product | transmembrane protein, LpiA-like |
Protein accession | YP_558985 |
Protein GI | 91783779 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.358436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.36986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCGACC GTGCATCGAA AGCGCTCGGT AACCGGGGGC TTCTCTCGCC TGTTCTCGCT CTCGTGATCG GCGTGCTGCT GCTGGTCGTC TTGCAACATC TCTCGCAAGC GGTCGACTAT CGCTCGGTGA TGCGTCAGTT GCGTGAACTG ACGGCCGGCG AGTGGGTCGC CGCGCTCGGC GCCACCGCGC TCAGTTACGT GGCGCTGGTC GGCCGCGACG CCGTCGGCTT GCGCTATCTG GGCGTGGCCG TTCCGCGTGT GGCGCTGTGG ATCGGCGCGA CCGCGGGCTC GGCACTCGGC AATGCCACCG GTTTCGGCGC GCTCACAGGC GGCGCCGTGC GCGCGCGCGT CTACAGCGTG GCGAGCGTCA CGCCCACGCA GATCGGGCGC ATGACGGTGT TCACGAGCGT GTCGCTCGCG CTCGCGCTGG TGCTGATGAC GGCGCTCGGC ATGCTCGGCC TCGCCGGCAC GCTCGCGCCG ATGCTGCATC TCGAGCCCGT CGCGCTGCGC TGGAGCGGGG CGGCGCTGCT GGTCGCGCTG GCGCTGGCCG CCGCCGCATG CCGCAGCGAA ACGCGCCCGC TCCGCACGCG CTGGCAGTGG CTCTCGTTCG ACCTTCCCGC GCGCCGCGAT CTGCTCGCGC AGGTGGCGCT CGCGGTACTC GACGTGGTGG CCGCCGGCCT CGCGTTGTGG GCGTTGCTGC CGCATGCGGA CGTGAGCTTC GTGACCTTCA TCACGGTCTA CGCCGCGGCC ATGCTGCTCG GTATGATCGG CCATACGCCC GGTGGCGTCG GCGTGTTCGA GGCGGCGATG GTGTTCACGC TGAACGGCAG CGTGCCAACG CATCAGATGG TTGCCGCGCT GCTCGCGTAT CGGGCGATTT ATTTCGGCGT CCCGCTGATC GTCTCGGCCG CGCTGCTCGC CGGTTTCGAG GGGCGTGCGC TGAAAAGCCG TCTGCCGCTG CAGCATGCGG CTGCCGCGTC GAAGCTTGCG CCGCTGTTCC TGAGTCTCGT CACGTTCGTG GTGGGCGGCA TGCTGGTGAT TTCCAGCGCG ACGCCCGCGT TCTGGCAACG CATCCGCATT CTGCGCGACG TGCTGCCGCT ATGGGTGCTC GAAAGCTCGC AGATGCTTTG CAGCGTGCTC GGCGTGCTGC TGCTGTTCGT CGCGCGTGGT TTGCTGCGGC GGCTGGACGC CGCGTGGTGG ATGACGCTCC TGCTGGCGGT GCTGAGTCTC GCGTTGTCAT TGACCAAAGG GCTTGCGTTC GTGGAAGCGG GCGTGCTCGG CATGCTGATC GTGCTGCTGC TGTCCACGCG CCAGCGTTTC AACCGTCATT CGTCGCTGTT CGCGGAGCGC TTTACGGCGG GCTGGCTGGT TTCGGTGGCG ATGGTGCTGA TGCTCGCCAC GTGGGTCATG CTGTTTGCTT TCCGCGACGT GCCGTACACG CGCGACCTGT GGTGGCAATT CGCCTTCGAC GAACGCGCGC CGCGTGCGCT GCGCGCAACG CTGGCCGCGA GCCTGTTCGC CGCGACGTTC GCCTTCTGGC AACTGTTGCG TCCGGCGCCG GGCCGCTTCG TCAAGCCGGC GCCGGAAGAT CTGCACGACG CGGCGCGCAT CGTGCGCGCG CAGGAGCGCA GCGACGCCGG TCTTGCGCTG ATGGGCGACA AGAGCTTCCT GTTTTCCGAG TCGCGCGAGG CTTTCCTGAT GTACGCGAAA TACGGCCGTA CGTGGGCCGC TTTGCACGAT CCGGTGGGGC CGCGCGAAGA GTGGGCCGGC CTGATCAGCA AGTTCGTCGC GCTCGCGCAT GCGCACGGCG GGCGCGCGGC GTTCTATCAG GTGCGCGCCA ACGCTTTGCC GCTTTATCTC GACGCAGGTC TCACGCTGAT GAAACTCGGC GAAGAAGCGC ATATCGTGCT GGACGACTTC GACCTGAAGG GCTCGCATCG CGCGCATCTT CGCTATGCGC TCAAACGCGG CGAGCGTGAT GGCTTCACCG TCGAAGTGAT CGATCAGGCG AACGTGCCCG CGTCGCTCGA CACGCTGCGC GGGATTTCCG ATGGCTGGCT CGACAGCCGC GACGCGCGCG AAAAGAGCTT CTCGGTCGCC GCGTTCACGG ACGAGTACCT CGCCGCGCAA TCGGTGATGC TGGTGCGCCA GAACGGCGAG CCGGTCGCGT TCGTCACCTT CATGACGACC GATATGAACA CCGAAGCGAC CGTCGGCGTG ATGCGTCATG TGGAAAGCGC GTCGCCGTAT GCGATGGAAT ATCTGTTCAC GCAACTCGCG CTGCATCTGA AGCAGGCGGG TTTCCGCTCG CTCAGTCTCG GCATCGCGCC GCTGTCGGGC ATGCAGCCCA CGCCGCTCGC TTCGCGCTGG CACCGGCTGG CCGGCATGGT GTGGCGTTTC GGCGGCCGCT TCTATAACTT CCGCGGACTG CGCGCTTTCA AGAGCAAATT CCAGCCGCAT TGGGAGCCGC GCTATCTCGC GGCGTCGGGT TCGGTGGGCG TGTTCTTCAC ACTCGCGGAC CTGTCATTGC TGGCGGGAGG CCGGCGTTCA TGA
|
Protein sequence | MFDRASKALG NRGLLSPVLA LVIGVLLLVV LQHLSQAVDY RSVMRQLREL TAGEWVAALG ATALSYVALV GRDAVGLRYL GVAVPRVALW IGATAGSALG NATGFGALTG GAVRARVYSV ASVTPTQIGR MTVFTSVSLA LALVLMTALG MLGLAGTLAP MLHLEPVALR WSGAALLVAL ALAAAACRSE TRPLRTRWQW LSFDLPARRD LLAQVALAVL DVVAAGLALW ALLPHADVSF VTFITVYAAA MLLGMIGHTP GGVGVFEAAM VFTLNGSVPT HQMVAALLAY RAIYFGVPLI VSAALLAGFE GRALKSRLPL QHAAAASKLA PLFLSLVTFV VGGMLVISSA TPAFWQRIRI LRDVLPLWVL ESSQMLCSVL GVLLLFVARG LLRRLDAAWW MTLLLAVLSL ALSLTKGLAF VEAGVLGMLI VLLLSTRQRF NRHSSLFAER FTAGWLVSVA MVLMLATWVM LFAFRDVPYT RDLWWQFAFD ERAPRALRAT LAASLFAATF AFWQLLRPAP GRFVKPAPED LHDAARIVRA QERSDAGLAL MGDKSFLFSE SREAFLMYAK YGRTWAALHD PVGPREEWAG LISKFVALAH AHGGRAAFYQ VRANALPLYL DAGLTLMKLG EEAHIVLDDF DLKGSHRAHL RYALKRGERD GFTVEVIDQA NVPASLDTLR GISDGWLDSR DAREKSFSVA AFTDEYLAAQ SVMLVRQNGE PVAFVTFMTT DMNTEATVGV MRHVESASPY AMEYLFTQLA LHLKQAGFRS LSLGIAPLSG MQPTPLASRW HRLAGMVWRF GGRFYNFRGL RAFKSKFQPH WEPRYLAASG SVGVFFTLAD LSLLAGGRRS
|
| |