Gene Bxe_A2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A2012 
Symbol 
ID4004539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp2704004 
End bp2705035 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content62% 
IMG OID637947625 
Productnitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_559006 
Protein GI91783800 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.452501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTT CGCATCTTCT CTCCCGCCTT GCGGTGTCCG CGCGTTCATT CGCAACGCGC 
AGCGCCGCTG CGGCCACGCT GGCCGGCGCC GTAGCGGTCG CGTTGATTGC GCCGCCGGCT
CATGCCGACG ACCACGTCAG CTTGCTGACC AGCTGGTACG CGCAAGCCGA ACACGGCGGT
TTCTATCAGG CAGTCGCGAC CGGCATCTAC AAGAAATATG GGCTCGACGT AACCATCCGG
ATGGGCGGTC CGCAAGTCAA TGGCATGCAG TTGCTTGCCG GCGGTCAGGC GGACTTTCTG
CTCGGCTACG ACTTTCAGGT GCTGTCGGGC GTGGAAGCCG GTATTCCCGT CACCACGGTG
GCTGCCGCGT TCCAGTACGA CCCGCAAGGC ATGATGACCC ACGCCGACGT GACCAGTCTC
GCCGGTCTGA AGAACAAGAC GATCCTCGTC GCCGGTTCGG GCCGCACGAC GTGGTGGCCG
TGGCTGAAGG CGAAGTATGG CTATACCGAA GCGCAAGCAC GCCCGTACAC CTTCAACCTG
CAACCGTTCT TCGCCGATCC GAACGTTGCA ATGCAGGCGT ATCCGTCGTC TGAAACGTTC
CAGGCCGAAC AGGCTCATGC GAACGCGCAC TTCTTCCTGT TCGCCGACGA CGGCTATCCG
CCGTACAACA CCACGATCGT CACGATGCGC GACACCGTGA AAAACAGGCC GGACGTAGTG
GCGCGTTTCG TGAAGGCGTC GATGGAAGGG TGGAAGAGCT ATCTGAACGA TCCCGCGCCG
GGCAATGCAC TGATCAAGAA AGACAACCCG CAGATGAGCG ACGCGCAGCT CGCCTACGGC
GTCGCGCAGT TGAAGAAGCT CAAGCTCGTG ACCGGCGGCG ATGCAGCTAC GCAGGGCATC
GGCACGATGA CCGACGCGCG CTGGAAAAAG ACCTTCGACT ACATGGTCGA CGCCAGGCTG
CTGAAACCCG CCACCGACTA TCACGCGGCC TACACGCTGC AATTCATTCA GAACGCGAAG
GTGATGCCTT GA
 
Protein sequence
MRISHLLSRL AVSARSFATR SAAAATLAGA VAVALIAPPA HADDHVSLLT SWYAQAEHGG 
FYQAVATGIY KKYGLDVTIR MGGPQVNGMQ LLAGGQADFL LGYDFQVLSG VEAGIPVTTV
AAAFQYDPQG MMTHADVTSL AGLKNKTILV AGSGRTTWWP WLKAKYGYTE AQARPYTFNL
QPFFADPNVA MQAYPSSETF QAEQAHANAH FFLFADDGYP PYNTTIVTMR DTVKNRPDVV
ARFVKASMEG WKSYLNDPAP GNALIKKDNP QMSDAQLAYG VAQLKKLKLV TGGDAATQGI
GTMTDARWKK TFDYMVDARL LKPATDYHAA YTLQFIQNAK VMP