| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1967 |
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| Symbol | |
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| ID | 4002929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 2753356 |
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| End bp | 2756493 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637947670 |
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| Product | RND family multidrug efflux protein |
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| Protein accession | YP_559051 |
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| Protein GI | 91783845 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.585173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0103305 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA CGCATGAGGA GGGACGCTTC AACCTGTCCG CATGGGCGTT GCGCCACCAG
GCGCTGGTCG TTTTCCTGAT CGCGCTCGCG ACCGCCTTCG GCATTCTCGC CTATACGCGG
CTCGCGCAAT CCGAAGACCC GCCCTTCACG TTCCGCGTGA TGGTGATCCG CACCTTCTGG
CCCGGCGCCA CCGCGCGCCA GGTGCAGGAA CAGGTGACGG ACCGCATCGG CCGCAAATTG
CAGGAAACGC CCGCCATCGA CTTCGTGCGC AGCTACTCGC GCCCCGGCGA ATCGCTGATG
TTCTTCTCGA TGAAAGACTC GGCGCCGGTC AAGGACGTGC CCGAAACCTG GTACCAGGTG
CGCAAGAAAG TCGGCGACAT CGCAGCGACG CTGCCACAAG GCATTCAAGG CCCGTTCTTC
AACGACGAAT TCGGCGACGT CTACACCAAC ATCTACACAC TCGAAGGCGA CGGCTTCTCC
GCCGCGCAAC TGCACGACTA CGCGGACCAG TTGCGCACGG TGCTGCTGCG CGTGCCGGGC
GTCGGCAAGG TCGATTATTT CGGCGATCCG GATCAGCACA TCTACATCGA GATCGCCAAC
ACGCAGCTCA CGCGTCTGGG CATCTCGCCG CAGCAACTCG GCCAGGCGAT CAACTCGCAG
AACAGCGTTT CTCAGGCCGG CACGCTGACC ACCGCCGACG ACCGCGTGTT CGTGCGTCCC
ACCGGGCAGT TCAAGGACGT CAACGCGCTC GCCGACACGC TGATCCGCAT CAACAACCGC
TCGTTCCGTC TCGGCGATAT CGCCACCATC AAGCGCGGCT ACGACGACCC GGTCGCCACG
CAAATGCGCT CGGGCGGCAA GGCGGTGCTC GGCATCGGCG TGACCATGCA GCCGGGCGGC
GACGTGATCC GTCTCGGCAA GGCGCTCGAT CAGCAGATGG CCCAGTTGCG CCGCGCTCTG
CCCGTCGGCC TGCAACTCGT CGAAGTGTCG AGCATGCCGA CCGCCGTCGC GCATTCGGTG
GACGACTTTC TCGAAGCCGT CGCCGAAGCG GTGGCGATCG TGCTGGTGGT GAGCCTCGTT
TCGCTCGGCG TGCGCACCGG CATGGTGGTC GTGATCTCGA TTCCGGTGGT GCTCGCCGTG
ACGGCGCTGT GCATGTATCT GTTCGACATC GGCTTGCACA AGGTGTCGCT CGGCACGCTG
GTGCTCGCCT TGGGGCTGCT CGTCGACGAC GCGATCATCG CGGTCGAGAT GATGTCGGTG
AAGCTGGAGC AAGGCTGGAA CCGCACCCGC GCGGCGGCCT TCGCATACAC CAGCACTGCG
TTTCCGATGC TGACCGGCAC GCTCGTCACC GTTTCCGGTT TTCTGCCGAT CGCGTTGGCC
AAGTCCAGCA CCGGCGAGTA CACACGCTCG ATTTTCGAAG TGTCGGCGAT CGCGCTGATC
GCCTCGTGGC TTGCCGCCGT GGTGCTGATT CCGCTGCTCG GCTATCACCT GCTGCCCGAG
CGCAAACGCG AGGCGCACGA GGCGCACTTG CCCGACGATC ACGAGCACGA CATCTACGAC
ACGCGCTTCT ACCGGCGTCT GCGTGGCTGG ATCGGCTGGT GCATCGAGCG GCGCTTCGTC
GTGCTGGTGA TTACTGTCGT GCTGTTCGTG CTGGCTATGG CCGGTTTCAC GCTGGTGCCA
CAGCAGTTCT TCCCCAGCTC CGACCGTCCG GAGTTGCTGG TGGACGTGCG CCTGCCCGAG
GGCGCTTCGT TCGACGCCAC GCTGCGCGAG GCCACGCGGC TTGAAAAAGC GCTGGTGGGC
CGCCCGGAAA TCGATCACAC GGTGGACTTT GTCGGCACCG GTGCGCCGCG TTTCTATCTG
CCGCTCGATC AGCAGTTGCC GCAACCCAAT TTCGCGCAAT TCGTGATCAC GGCGAAGTCG
GTGAAGGATC GCGAAAAACT CGCGCAATGG CTCGAACCGG AATTGCGCAA CTACTTCCCG
GCGATCCGCA CGCGCCTGTC GCGTCTCGAG AATGGACCGC CCGTCGGCTA TCCGGTGCAG
TTTCGCGTGA GCGGCGACGA AATCGCCACC GTGCGCTCGA TCGCCGAGCG CGTCGCCGCG
AACATGCGCG CGGACCACGG CACGCGCAAC GTACAGTTCG ACTGGGACGA ACCCGCCGAG
CGCTCGGTGC GCTTCGAAGT CGATCAGAAA AAAGCGCGCG AACTCGGCGT GAGCTCCGAA
GACATTTCGA GCTTCCTCGC GATGACGCTC TCCGGCTACA CCGTTACGCA GTACCGCGAA
CGCGACAAGC TGATCAGCGT CGACCTGCGC GCGCCGAAAG CCGAGCGCGT CGATCCCGCG
CAGCTCGTCA CGCTCGCCAT GCCGACGCCG AACGGCCCCG TGCCGCTCGG CACGCTCGGC
CATCTGCGCA ATGACCTCGA ATACGGCGTG ATCTGGGAGC GCGACCGTCA GCCGACCATC
ACCGTGCAGT CCGACGTCGC GCCGGGCGCG CAAGGCATCG ACGTCACGCA TGCGGTGGAC
AAGGCGCTCA GCCAGATTCG CGCTACCCTG CCGGTCGGCT ACCGGATCGA AATTGGCGGC
TCCGTCGAGG AAAGCGGCAA AGGCCAGACC TCGATCAATG CGCAGATGCC GATCATGATC
ATTGCCGTGC TCACACTGCT GATGATCCAG CTGCAAAGTT TCGCGCGCGT GCTGATGGTC
GTGCTGACCG CGCCGCTCGG GCTGATCGGC GTGGTGCTCA CGCTGCTGCT GTTCGGCCAG
CCGTTCGGTT TTGTCGCCAT GCTCGGCGTG ATCGCGATGT TCGGCATCAT CATGCGCAAC
TCGGTGATTC TGGTCGATCA GATCGAGCAG GACATTGCCG CGGGCCACAA GCGTTTCGAC
GCGATAGTCG GCGCGACCGT GCGGCGTTTC CGGCCGATCA CGCTGACCGC CGCCGCCGCC
GTGCTCGCGC TGATTCCGCT CTTGCGCTCG AACTTTTTCG GCCCGATGGC GACCGCGCTG
ATGGGCGGCA TCACGAGCGC CACGATCCTC ACGCTGTTCT ATCTGCCCGC GCTGTACGCC
ACGTCGTTCC GCGTGCGTGC CGATGAACGC GAGCCGCAGA CGCCGTCCGC GTCCGGCACG
ACGCATACGG GGAATTGA
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| Protein sequence | MSTTHEEGRF NLSAWALRHQ ALVVFLIALA TAFGILAYTR LAQSEDPPFT FRVMVIRTFW
PGATARQVQE QVTDRIGRKL QETPAIDFVR SYSRPGESLM FFSMKDSAPV KDVPETWYQV
RKKVGDIAAT LPQGIQGPFF NDEFGDVYTN IYTLEGDGFS AAQLHDYADQ LRTVLLRVPG
VGKVDYFGDP DQHIYIEIAN TQLTRLGISP QQLGQAINSQ NSVSQAGTLT TADDRVFVRP
TGQFKDVNAL ADTLIRINNR SFRLGDIATI KRGYDDPVAT QMRSGGKAVL GIGVTMQPGG
DVIRLGKALD QQMAQLRRAL PVGLQLVEVS SMPTAVAHSV DDFLEAVAEA VAIVLVVSLV
SLGVRTGMVV VISIPVVLAV TALCMYLFDI GLHKVSLGTL VLALGLLVDD AIIAVEMMSV
KLEQGWNRTR AAAFAYTSTA FPMLTGTLVT VSGFLPIALA KSSTGEYTRS IFEVSAIALI
ASWLAAVVLI PLLGYHLLPE RKREAHEAHL PDDHEHDIYD TRFYRRLRGW IGWCIERRFV
VLVITVVLFV LAMAGFTLVP QQFFPSSDRP ELLVDVRLPE GASFDATLRE ATRLEKALVG
RPEIDHTVDF VGTGAPRFYL PLDQQLPQPN FAQFVITAKS VKDREKLAQW LEPELRNYFP
AIRTRLSRLE NGPPVGYPVQ FRVSGDEIAT VRSIAERVAA NMRADHGTRN VQFDWDEPAE
RSVRFEVDQK KARELGVSSE DISSFLAMTL SGYTVTQYRE RDKLISVDLR APKAERVDPA
QLVTLAMPTP NGPVPLGTLG HLRNDLEYGV IWERDRQPTI TVQSDVAPGA QGIDVTHAVD
KALSQIRATL PVGYRIEIGG SVEESGKGQT SINAQMPIMI IAVLTLLMIQ LQSFARVLMV
VLTAPLGLIG VVLTLLLFGQ PFGFVAMLGV IAMFGIIMRN SVILVDQIEQ DIAAGHKRFD
AIVGATVRRF RPITLTAAAA VLALIPLLRS NFFGPMATAL MGGITSATIL TLFYLPALYA
TSFRVRADER EPQTPSASGT THTGN
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