| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1966 |
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| Symbol | |
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| ID | 4002930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 2756496 |
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| End bp | 2757992 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637947671 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_559052 |
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| Protein GI | 91783846 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.391464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00633944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCACGC CCACACTCTT CCGATACTCG CGCATCACCG CGCTCGCCGG CATGGCATGC
GCGCTCGCCG CCTGCTCGTT CGGGCCGGGC GGCGAGCCGC CCGCCATGCC GCAACCCGCG
CACTACGGCG CCGAAGCGCA GCCGGCGCAA ACCGTGCCCG CGCAAGGCGT CACCCAGCAG
TTCGTGGTGG GCGCGAAGCC GGTGCCCGAA TGGTGGAAGC TGTATCAGTC GGACGCGCTG
AACGCGCTGG TCGACGAAGG CTTGCGCAGC AGCCCCACCC TCGCCGCGAC CGACAGGAGC
CTCGCCGCCG CGCGCGAGCA GTTGCGCGCG CAGATCGGCA GCTCGATGCT GCCCACCATC
GACGCCGGCG GCCAGGCGAC CCGCAATCGC GCGCTGGCGA TCCCTGAGAT CGGACCCAAC
ACGTTTCTGT ACAACGTCTT TGTCGGTCAA TTGCAGGCGC ACTACACGTT CGACCTGTTC
GGTGCGGCGC GCCTCGCCGA TGCCGCGCTC GCCGCGCGCG TCAACGTTCA GGCCTATCAG
TTCGACGCCG CGCGCCGCGC TCTGGCCGCC AACATCGTGA CCGCGGCGAT CACCAGCGCG
GCGCTGCATG CGCAGATCGA GACGACCGAA CGGCTCGTGA CGATCGCCAA CGATCAGGCA
CGCGACACGC AGCGGCGTTA TGCGCTGGGC GCGGTCTCGC ATGCGGATCA GCTGAGCGCG
CAACAAAGCG CGGCCAGCTT GTCGGCGAGC TTGCCGGGCC TGAAGCAGCA ATGGCTGAGC
ACGCGCCACG CGCTGGCGGT GCTACTCGGC CGGACGCCTG ACGCGGCGCC GGAGGATCTG
GCGCTCGCGC AACTGCACGT GCCTGAGCAG GTGCCGGTGG TGGTGCCGTC GGAACTGCTG
CGCAGCCGCC CCGACATTCA GGCCGCCGAC GCTGCGTTGA AGGCCGCGGC GGCCGATGTC
GGCGTCGCCA CGGCGCAGAT GTATCCGAGT CTGTCGTTGA GTGCATCGAT GGGACAAGGC
GGCTTTAGCT GGCCGGTCGC GCTCTCCGGT GCGGGCGCGA TCTGGAGCAT CGGTGCGTCG
CTGTCGCAGC CGTTGTTTCA TGGCGGCGCA CTGGTCGCGC AACGGCGTGC GGCGCTCGAT
ACCTATGACG CCACGGTCTC GCAGTACAAG CAAACGGTAT TGGCCGCGTT CCAGAACGTC
GCGGACACGC TTGCGGCGCT CGAGCACGAC TCGCAGGCGC TGGACGCCGC GAATATTGCG
GCGCGCTCGG CGCAAGGCAT CTTCGATGAA ACCTCCGGGC GCTACCGGCT GGGCGCGCTG
CCTGTGGCGT CGGCGCGTTC GAGCGAGCAG CAGTTCCGCA ACGCGCAGCT TGATGAGATT
CGCTATACGA GCGCGCGGCT GACGGACACG GCGGCGCTGT TCCAGGCGAT GGGGAATCCG
CCGGTTGAGA CGGGGGTGGG TGGGGCTTCG GCGGCGAGCG CTGGCGTCGC CGAGTAG
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| Protein sequence | MTTPTLFRYS RITALAGMAC ALAACSFGPG GEPPAMPQPA HYGAEAQPAQ TVPAQGVTQQ
FVVGAKPVPE WWKLYQSDAL NALVDEGLRS SPTLAATDRS LAAAREQLRA QIGSSMLPTI
DAGGQATRNR ALAIPEIGPN TFLYNVFVGQ LQAHYTFDLF GAARLADAAL AARVNVQAYQ
FDAARRALAA NIVTAAITSA ALHAQIETTE RLVTIANDQA RDTQRRYALG AVSHADQLSA
QQSAASLSAS LPGLKQQWLS TRHALAVLLG RTPDAAPEDL ALAQLHVPEQ VPVVVPSELL
RSRPDIQAAD AALKAAAADV GVATAQMYPS LSLSASMGQG GFSWPVALSG AGAIWSIGAS
LSQPLFHGGA LVAQRRAALD TYDATVSQYK QTVLAAFQNV ADTLAALEHD SQALDAANIA
ARSAQGIFDE TSGRYRLGAL PVASARSSEQ QFRNAQLDEI RYTSARLTDT AALFQAMGNP
PVETGVGGAS AASAGVAE
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