| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1950 |
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| Symbol | |
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| ID | 4002815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 2778145 |
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| End bp | 2779245 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637947686 |
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| Product | ABC polyamine transporter, periplasmic ligand binding protein |
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| Protein accession | YP_559067 |
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| Protein GI | 91783861 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.17949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.9413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC GGGTAGTGGG GCAAGTGGCG GCGCTGGTTC TGTGTGCGAC GCCGTGGTTG
ACGGCCGCTG CGAAAGACAC GCAACTGAAC GTGTATAACT GGTCCGATTA CATCGCCAAG
GACACCATTC CCAACTTCAC GAAGCAGACC GGCGTCCAGG TCAGATACGA CAACTACGAC
AGCGACGACA CGCTGCAAGC CAAGCTCCTC ACCGGCAATT CCGGCTACGA CATCGTCGTG
CCCACCAGCA ATTACGCCGG CAAGCAGATC GCCGCCGGCA TCTTCGCACC GCTCGACAAA
TCGAAGCTGC CTAACCTGAA ATACCTCGAT CCTTCGCTGA TGGCGCTCGT CGCGGGCGCC
GATCCCGGCA ACAAGTTTAC CGTGCCCTGG GCATACGGCA CGACCGGCCT TGGCTACAAC
GTCACCAAAG CGCAGCAGAT CCTCGGCAAG AACGTGCCGC TCGACAGCTG GGACGTGCTC
TTCAAACCGG AAAACATCTC GAAGCTGAAG GCCTGCGGCG TGTCGGTGCT CGACGCGCCG
GACCAGATGT TCGCCGCCGC GCTGCACTAC ATCGGCAAGG ATCCGATGAG CACGAATCCG
GCCGACTACC GCGCCGCGCT CGAGATGATG AAGAAGATCC GCCCGTATAT CACGCAGTTC
AACTCGTCGG GCTATATCAA CGACCTGGTG GGCGGCGACG TGTGCTTCGC GTACGGCTGG
TCCGGCGACA TTGTGATCGC CAAGCATCGC GCGGTCGAAG CGAAGAAGGC CTACAAGGTC
GAGTATTACA TTCCGAAGGG CGGCGCACCG GTATGGTTCG ACGTGATGGC GATTCCGAAG
GACGCGAAGA ACAAGGAAGC CGCGCTCGAG TGGATCAACT ACATCGAAAC GCCGCAGGTT
CACGCCGCGA TCACCAACGC CGTGTACTAT CCGAGCGCCA ACCTCGAAGC GCGCAAATAC
GTGGACAAGG ACGTGGCGAA CGACCCGGCA GTCTATCCGC CGCCTGAAGT CATCAAGACC
CTGTTCCTCC TCAAGCCGCT GCCGCCGGAA ATCCAGCGGC TGCAAACGCG GCTGTGGACT
GAGTTCAAGT CCGGCCGCTG A
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| Protein sequence | MKRRVVGQVA ALVLCATPWL TAAAKDTQLN VYNWSDYIAK DTIPNFTKQT GVQVRYDNYD
SDDTLQAKLL TGNSGYDIVV PTSNYAGKQI AAGIFAPLDK SKLPNLKYLD PSLMALVAGA
DPGNKFTVPW AYGTTGLGYN VTKAQQILGK NVPLDSWDVL FKPENISKLK ACGVSVLDAP
DQMFAAALHY IGKDPMSTNP ADYRAALEMM KKIRPYITQF NSSGYINDLV GGDVCFAYGW
SGDIVIAKHR AVEAKKAYKV EYYIPKGGAP VWFDVMAIPK DAKNKEAALE WINYIETPQV
HAAITNAVYY PSANLEARKY VDKDVANDPA VYPPPEVIKT LFLLKPLPPE IQRLQTRLWT
EFKSGR
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