| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1941 |
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| Symbol | |
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| ID | 4003149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 2788924 |
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| End bp | 2790018 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637947695 |
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| Product | ABC transporter, periplasmic ligand binding protein |
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| Protein accession | YP_559076 |
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| Protein GI | 91783870 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00208553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAA GAAATCTGCT GACCGCTTTC GCATGGGGCG CGGCCTCGCT GGCGCTCGCC
GCGCCGCTCG CGCAAAGCGC GCAGGCCGCC GATGCGCCGG GCGTCGCGTT CGTTTATCTC
GGCAATCCGG GCGATGCCGG CTGGACCTTC GCGCACGATC AGGGCTCGAA GGAAGCGGAA
GCGAAGTTCG GCAGCAAGAT CAGGATCACG CGGATCGAAA ACGTGCCGGA ATCGGCCGAC
TCCGAGCGCG TGTTCCGCGA TCTGGCGAAC AAGGGCAACA AGATCATCAT CGGTTCGAGC
TTCGGCTATC AGGACTTCGA ACTGAAGGTC GCGAAAGATT TCCCGGACAC CGTTTTCCTC
CACGCAACCG GCTACAAGAA GGCGCCGAAC TTCGGCACCT ATGACGTGCG TATGTACCAG
GGCGCGTACC TCGCCGGCGT TGCCGCGGGC TACGTGACGA AGACCAATAC GCTCGGCTTC
GTGGCGTCGG TGCCGATTCC GGAGGTGATC CGCAACATCA ACGCGTACAC GCTCGGCGCG
CGTTCGGTGA ATCCGAAGGT GCACACCAAG GTCATCTGGA TCAACAGCTG GTTCGATCCG
GGCAAGGAAA AGCAGGCGGC CGAAACGCTG ATCGGGCAGG GCGCGGACGT GCTGCTGCAG
AACACCGATT CGAGCGCCAC GCTCGCCACG GCATCGGAAA AGCACGTGCA CGCGTTCGGC
TGGGATTCGG ATATGAAGAA GTTCGGTCCT GACGCGCACC TCGGCTCGGT GGTCGCGCAC
TGGGGCGTGT ATTACAACGC GGCGATCCAG CAGGTGCTGG ACGGCAAGTG GAAGAACGAT
CCGGTGTGGT GGGGCATTCC GCAGAAGGCG GTCAACCTCG AAGATCTGAA CACGTCCGCG
ATTCCGGCTG ACGCGCAGAA GCAGGTTTCG GCGAGGCGCG ACGAACTGGC GGGCGGCAAG
TGGGACGTGT TCACCGGCCC GATCAAGGAT CAGTCCGGCG CGGTGAAGGT GCCGGCCGGC
AAGACGCTGA CCGATCCGGA ACTGCAACGC CTGAACTGGT ACGTGGAAGG CGTGGACGGA
TCGCTGCCGA AGTAA
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| Protein sequence | MKRRNLLTAF AWGAASLALA APLAQSAQAA DAPGVAFVYL GNPGDAGWTF AHDQGSKEAE
AKFGSKIRIT RIENVPESAD SERVFRDLAN KGNKIIIGSS FGYQDFELKV AKDFPDTVFL
HATGYKKAPN FGTYDVRMYQ GAYLAGVAAG YVTKTNTLGF VASVPIPEVI RNINAYTLGA
RSVNPKVHTK VIWINSWFDP GKEKQAAETL IGQGADVLLQ NTDSSATLAT ASEKHVHAFG
WDSDMKKFGP DAHLGSVVAH WGVYYNAAIQ QVLDGKWKND PVWWGIPQKA VNLEDLNTSA
IPADAQKQVS ARRDELAGGK WDVFTGPIKD QSGAVKVPAG KTLTDPELQR LNWYVEGVDG
SLPK
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