| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1926 |
|---|
| Symbol | |
|---|
| ID | 4003164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 2802994 |
|---|
| End bp | 2803944 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637947710 |
|---|
| Product | putative polysaccharide deacetylase |
|---|
| Protein accession | YP_559091 |
|---|
| Protein GI | 91783885 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | [TIGR03212] putative urate catabolism protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.644925 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACTCG ACCCGAACTA CCCACGCGAT CTGACCGGCT ACGGCCGCCA CCCGGTGCAG
GCCAACTGGC CGGGGCAAGC GCGTGTCGCG GTGCAATTCG TCCTGAACTA CGAAGAAGGC
GGTGAAAACT GCGTGTTGCA CGGCGATCCC GGCTCGGAGC AGTTCCTGTC GGAAATCGTC
GGCGCCGCGG CTTATCCGGC TCGCCACATG AGCATGGAGT CGATCTACGA ATACGGCTCG
CGCGCGGGTG TGTGGCGCAT CCTGCGCGAA TTCGAAAAGC GCGGCCTGCC GCTTACGGTG
TTCGGCGTAG GTATGGCGAT CGAACGGCAT CCGGAACTGG CGCGCGCCTT CGTGGAACTC
GGCCATGAGA TCGCCTGCCA CGGCTATCGC TGGATTCACT ATCAGGACGT GTCGCCGGAG
AAAGAAGCGG AGCACATGCG TCTGGGCATG GCCGCGATCG AACGCGTGAC AGGCGAGCGT
CCGCTCGGCT GGTACACCGG TCGCGACAGT CCCAATACGC GTCGTCTGGT CGCCGAATAC
GGCGGTTTCC TCTACGACTC GGACTACTAC GGCGACGATC TGCCGTTCTG GATGGACGTG
GGCGTTACCG GCGGCGCGAC GGTGCCGCAA CTGATCGTGC CGTACACGCT CGACACCAAC
GACATGCGCT TTGCCAGCCC GCAAGGCTTC AACACGGCGG ACCACTTCTT CACGTATCTG
CGCGATGCAT TCGACGTGCT CTACGAAGAA GGCGACGAAG CGCCGAAGAT GCTGTCCATC
GGCATGCATT GCCGTCTGCT TGGCCGGCCT GGTCGTTTTC GCGCGCTGCA ACGTTTTCTC
GATCATATCG AACAGCACGA TCGCGTGTGG GTGACGCGGC GCGTCGACAT TGCGCTCCAC
TGGCGCGAAC ATCATCCTTA CCAACGAGAC AACCGCGGGG CAGCGGCATG A
|
|---|
| Protein sequence | MPLDPNYPRD LTGYGRHPVQ ANWPGQARVA VQFVLNYEEG GENCVLHGDP GSEQFLSEIV
GAAAYPARHM SMESIYEYGS RAGVWRILRE FEKRGLPLTV FGVGMAIERH PELARAFVEL
GHEIACHGYR WIHYQDVSPE KEAEHMRLGM AAIERVTGER PLGWYTGRDS PNTRRLVAEY
GGFLYDSDYY GDDLPFWMDV GVTGGATVPQ LIVPYTLDTN DMRFASPQGF NTADHFFTYL
RDAFDVLYEE GDEAPKMLSI GMHCRLLGRP GRFRALQRFL DHIEQHDRVW VTRRVDIALH
WREHHPYQRD NRGAAA
|
|---|
| |