| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1836 |
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| Symbol | |
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| ID | 4003313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 2883066 |
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| End bp | 2884907 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637947798 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_559179 |
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| Protein GI | 91783973 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.208772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.385639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAA CCGTCGGCGA TTTCATCATT GAACGACTTC ACGCCTGGGG CGTGCGCCGC
ATCTATGGCT ACCCCGGCGA CGGCATCAAC GGCGTTTTCG GCGCGCTCAA CCGCGCGCAA
ACCGAAGCCG CCAGGCACCG CAAAAAAGGA TCCGACGACA GCGCGCACGC GATCGAATTC
GTCCAGGTTC GCCACGAGGA AATGGCCGCC TTCATGGCGG CGGCCCATGC AAAATTCACC
GGCGAGCTTG GCGTATGCAT CGCGACCTCC GGCCCCGGCG CCTCGCATCT GCTGACCGGA
CTGTACGACG CTCGCATGGA CCATATGCCC GTGCTCGCCA TAGCGGGCCA GCAGGCGCGC
GCCGCGCTCG GCGGTCACTA TCAGCAGGAG CTCGACCTCG TCTCCATGTT CAAGGACGTG
GCCGGAGCTT TCGTCGAACA GGCTACGGTG CCCGCGCAAG TGCGCCATCT GGTCGACCGC
GCTGTGCGCA CGGCACTTTC CGAACGCAAG GTCACGGCGC TGATCCTGCC CAATGATCTG
CAAGATCTGC CCTACGAAGC ACCCGGACGC AAGCACGGCA CGCTGCATTC GGGCGTGGGT
TATCGCGCGC CGCGCCTCGT GCCCTACCCC GACGATCTTC AGCAAGCCGC CGATATCCTG
AACGCCGGCA AGAAAGTGGC GATCCTCGTC GGCGCGGGCG GCCTGCACGC CACCGACGAA
CTGATCGCCG TCGCCGAAAA GCTCGGTGCG GGGGTCGCGA AGGCGCTGCT CGGCAAAGCC
GCGCTGCCCG ACGATCTGCC GTGGGTGACC GGCTCGATCG GACTGCTCGG CACCAAACCC
AGCTACGACC TGATGGCCGA ATGCGATACG CTGCTGATGA TCGGCTCCGG TTTTCCGTAC
GCGGAATTTC TGCCGAAGGA AGGCGCGGCG CGCGGCGTGC AGATCGACAT CAAGGCCGAC
ATGCTGAGCC TGCGTTACCC GATGGAAGTG AATCTGGTCG GCGACAGTGC CGAAACCTTG
CGCGCGCTGC TGCCGCTACT CGAAGAGAAG AAGGATCGCG CGTGGCGCAA GCGGGTCGAA
GGCTGGAGCG CAGACTGGTG GAAAACGCTC GACAAGCGTG CGCACGAGCC GGGCAAGGAC
GCCGTCAATC CGCAGCTCAC CGTGTGGGAA CTGTCGAAGC GCATTGCGTC CAACGCGATC
GTCACGAGCG ACTCCGGTTC GGTGGCGAAC TGGTACGCGC GCGACCTGAA AGTGCAGCGC
GGCATGATGT GTTCGCTCTC GGGCGGACTG GCGTCGATGG GCGCCGCCGT GCCATATGCG
ATCGCCGCCA AATTCGCGTA TCCGGAGCGC CCTGTGATTG CGCTCGTCGG CGACGGCGCA
ATGCAGATGA ACAATATGGC CGAGCTGATC ACCGTGTCGA AGTACTGGCG AGGCTGGTCC
GATCCGCGCT GGATCTGCAT GGTGCTGAAC AACCAGGACC TCAACCAGGT GACGTGGGAA
CAGCGCGCGA TGGAAGGCGA TCCGAAGTTC GAAGCATCGC AGGACATTCC CTGCGTGCCG
TATCACAAGT TCGCGGAACT GATCGGCCTC AAGGGCATCT ACGTCGACGA CGCGCAGCAG
ATGGGCGCCG CCTGGGACGA TGCGCTCGCC GCCGACCGCC CGGTGGTCAT CGAAGTGAAG
GCCGATCCCA ACATCGCGCC GCTGCCGCCG CATATCACGC TGGCCCAGGC GAAGGCGTTT
GCATCGACGC TGATGAAGGG CGATCCCAAC GAAGGCAATG TGATAGTCGA GACGGCGAAG
CAGGTGCTCG ACGCGGTGCT GCCGGGCCAT CACAGCAAGT GA
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| Protein sequence | MSQTVGDFII ERLHAWGVRR IYGYPGDGIN GVFGALNRAQ TEAARHRKKG SDDSAHAIEF
VQVRHEEMAA FMAAAHAKFT GELGVCIATS GPGASHLLTG LYDARMDHMP VLAIAGQQAR
AALGGHYQQE LDLVSMFKDV AGAFVEQATV PAQVRHLVDR AVRTALSERK VTALILPNDL
QDLPYEAPGR KHGTLHSGVG YRAPRLVPYP DDLQQAADIL NAGKKVAILV GAGGLHATDE
LIAVAEKLGA GVAKALLGKA ALPDDLPWVT GSIGLLGTKP SYDLMAECDT LLMIGSGFPY
AEFLPKEGAA RGVQIDIKAD MLSLRYPMEV NLVGDSAETL RALLPLLEEK KDRAWRKRVE
GWSADWWKTL DKRAHEPGKD AVNPQLTVWE LSKRIASNAI VTSDSGSVAN WYARDLKVQR
GMMCSLSGGL ASMGAAVPYA IAAKFAYPER PVIALVGDGA MQMNNMAELI TVSKYWRGWS
DPRWICMVLN NQDLNQVTWE QRAMEGDPKF EASQDIPCVP YHKFAELIGL KGIYVDDAQQ
MGAAWDDALA ADRPVVIEVK ADPNIAPLPP HITLAQAKAF ASTLMKGDPN EGNVIVETAK
QVLDAVLPGH HSK
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