| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1830 |
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| Symbol | |
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| ID | 4003318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 2890784 |
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| End bp | 2892400 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637947803 |
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| Product | major facilitator superfamily drug efflux transporter |
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| Protein accession | YP_559184 |
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| Protein GI | 91783978 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.234878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTG CGCCGGGCAG CGTCCGCGAG GAAGAGAGCT CCGCCGGTCA GGGCATCAGG
TCGTTCCGGC AGTCACTGCT TGCGATGCTG GGGCTATCGA GCGTGGTCAT GATGGTCGCG
ATCGACCAGA CGGTGGTCGG TACGGCTTTG CCGTCTATCG TCGCGGATCT GCATCGCTTC
GATCTCTACG AGTGGGTCGC CACCTCCTAC CTGCTGACGT CGGTGATTAC CGTGCCGATT
TTCGGCCGGC TCGGAGACTG GCTGGGAAGA AAACCCCTGA TCGTCATTGC GATCGTGCTC
TTCACTGTTG CATCGGCGTT GTGCGGTTTT GCGCAGACCA TGCCCATGCT GATCGCCTGC
CGCGCATTGC AGGGGATAGG CGGCGGCATG CTGGTCGGAA CCTGCTTTGC CTCCATACCG
GACCTCTTTC CGGATCCGGT GGTGCGGCTG CGCTGGCAGG TCCTGTTCTC GAGCGCCTTT
GGTCTGGCCA ATGCCGTCGG GCCGTCGCTC GGCGGCTTTC TGAGCCAGCA TTACGGGTGG
CGCTCCGCCT TTCTCGTCAA CATACCGGTG GGCGTTGTAA GCCTTTATCT CGCAGCGAAG
CATCTGCCGC ATATCCGGCA TGCCAGGTTC GAGCGGTTGA ACGCGGACTG GAAAGGAGCA
TGTCTGATTA CCGTTGCGCT GGGCTCGCTT CAGCTCCTCG TCGAGGCGGC AGGTAGTACG
GGTTCCCATG CCGGCCTCTA CGCGGCGGTG GCCGTGCTTT CGATGGGATT GCTGGTGCGG
CAGGAGCGGC GCGCGCCCAA TCCCGTCATT CCGCCCGGCT TGCTCAAGGA TCGCGCGACC
CTCGTGCTGC TCGTGCTGTC GCTGCTGATG GGCGTCGCGA TGTTCGTGCT GCTCTTTTAT
GTGCCGCTGC TGTTGCAGGG CGGTCTGGGG CTCGACGCCG GCAAGGCTGG AATCGTCGTG
ACACCGATGG TCGTGTGCAT CACGGTCGGC ACCATTACCA ACACGCGCAT CGTGACTCGC
CTGGAGAAGC CGAACCTCCT GCTGTATCTC GGGTTTGGTC TTCTCGGCGT GTCCTGCGCG
GCGATTGCTT CTGTCGGCGC CGGCGGTGCG AGCGTGGGGT TCGTCGTCGC GATGGTGATG
GCCGGCGTCG GTATCGGGTT TGTGATGCCG AACCTGACCG TGTTCGTGCA GCAGGTCGCC
GGAAAAACGC GCCTCGGCAT TGCCACGGCG CTGATCCAGT CGGCACGGAT GGTGGGCGGC
ATGCTGGGTA CGGCGATGGC GGGGACGATG GCGCGCCACC TGTATCGAGC AGGGCTCGAA
CCGGTGTTGA CGGCGAAGGC AGCCGCAGCG CCCGGACATT GGACCCTTGC GTTGCAGGAC
CCGCAAACGC TCATGTCGGC GCAGGCGGCA GCGGACTTCG CCGGGCACGC CAATCACGCC
GGCTTCGATG GCGAGGCAAT GCTGGGGGCG GCGCGCGCGG TGCTCGTCCA CGCGCTGCAA
ACGTCGCTCT TCGGGGTCGC GCTGCTGATG GCCGCGGCGT GCGTGATTGT GCGGCTACTG
CCGTTGATTC CGATTACCTC GATAGCGGCA TCGAGGCAGC AGGGCGCACC GGAATAA
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| Protein sequence | MSIAPGSVRE EESSAGQGIR SFRQSLLAML GLSSVVMMVA IDQTVVGTAL PSIVADLHRF
DLYEWVATSY LLTSVITVPI FGRLGDWLGR KPLIVIAIVL FTVASALCGF AQTMPMLIAC
RALQGIGGGM LVGTCFASIP DLFPDPVVRL RWQVLFSSAF GLANAVGPSL GGFLSQHYGW
RSAFLVNIPV GVVSLYLAAK HLPHIRHARF ERLNADWKGA CLITVALGSL QLLVEAAGST
GSHAGLYAAV AVLSMGLLVR QERRAPNPVI PPGLLKDRAT LVLLVLSLLM GVAMFVLLFY
VPLLLQGGLG LDAGKAGIVV TPMVVCITVG TITNTRIVTR LEKPNLLLYL GFGLLGVSCA
AIASVGAGGA SVGFVVAMVM AGVGIGFVMP NLTVFVQQVA GKTRLGIATA LIQSARMVGG
MLGTAMAGTM ARHLYRAGLE PVLTAKAAAA PGHWTLALQD PQTLMSAQAA ADFAGHANHA
GFDGEAMLGA ARAVLVHALQ TSLFGVALLM AAACVIVRLL PLIPITSIAA SRQQGAPE
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