| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1771 |
|---|
| Symbol | |
|---|
| ID | 4004872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 2954473 |
|---|
| End bp | 2955438 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637947857 |
|---|
| Product | putative nucleoside-diphosphate-sugar epimerase |
|---|
| Protein accession | YP_559238 |
|---|
| Protein GI | 91784032 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0951305 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.858803 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATCT TCATCACTGG CGCGACGGGC GTCCTCGGTT TCGCGGTCGT TCGCGAACTT
ATCGCGGCGG GCCACGCGGT GACAGGCCTC GTGCGTTCGG CGCATGCCGT CGCCCCGCTC
GAGGCAGTGG GGGCGAGGGC ATGTCGCGGA ACGATCGAGG ATACCGACAT CTTGCGCCAG
GAGGCTGCGC TCGCCGACGG TGTGATCCAT ACCGCCTTCT TCCACGCGCT CTCGCATGCC
AGCCTGGGCA TTCGCGCACG GATACTTTTC GGCGGCCCGC CGGTCCGTAT CGTCGAACGC
TTCGCGGCCG CGGCGGTCGC TGTGGATCAG CGCGCCATCG AGACGTTCGG CGAGGCACTC
GGGGCACGAA AGGTCTCGCT GGTCATCGCC TTTCCGACCA TGGCGATGGC AGCAGGGCGG
CACGCGCTGG AGACCGACGA TGCCGATCGC GCAGCCGTCG GCGGTGCAAG GGCGCGCTCC
GAGCAGGCCG CAGTTGACCT TGTGCGGGCC GGCGTGAACG CCTCCATCGT TCGTCTGCCG
CCCACGGTAC ATGATGAAAC GAAGCTCGGG CTCGTCACGC GGTTGATCGA GATTGCACGG
AAAAAGCGGA TGTCCGCCTG TCCCGGTGAT GGGTTCAACC GATGGGCCGC CGTTCACAGG
CTGGACGCAT CGCGGCTGTT TCGGCTTGCG CTCGAAAACG GCGAGCCCGG GGACCGCTAT
CACGGCGCGG CCGAGGAGGG CATGCCGTTC CGCGATATCG CCAACGCGAT TGGACGCTAT
CTCGACGTCC CTGTGGTGCC TTTGCCCGCT AAAGACTGTG CGAGGCATTT CGGCTGGCTT
GCGCCATTTG TCGCTGCGGA CAATCCGGTT TCCAGTCAGA TGACACGGGA ACGCCTGGGT
TGGACGCCAC AGCATCCGTC ATTGATGAAC GACCTTGCGG CCGCCTTGCG CGATCGGGGC
CGCTAA
|
|---|
| Protein sequence | MRIFITGATG VLGFAVVREL IAAGHAVTGL VRSAHAVAPL EAVGARACRG TIEDTDILRQ
EAALADGVIH TAFFHALSHA SLGIRARILF GGPPVRIVER FAAAAVAVDQ RAIETFGEAL
GARKVSLVIA FPTMAMAAGR HALETDDADR AAVGGARARS EQAAVDLVRA GVNASIVRLP
PTVHDETKLG LVTRLIEIAR KKRMSACPGD GFNRWAAVHR LDASRLFRLA LENGEPGDRY
HGAAEEGMPF RDIANAIGRY LDVPVVPLPA KDCARHFGWL APFVAADNPV SSQMTRERLG
WTPQHPSLMN DLAAALRDRG R
|
|---|
| |