| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1761 |
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| Symbol | |
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| ID | 4004823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 2965845 |
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| End bp | 2967074 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637947867 |
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| Product | putative type IV secretion system protein VirB10 |
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| Protein accession | YP_559248 |
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| Protein GI | 91784042 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.359566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.289006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACG ATACTGAACG CAACGTGATC GAGCCCGACG ACTCCGCGGG CCAGCAGCCA
GCGCGCAACC CGAATGGCGG TGCTGTGCCG ATGTCTGCCG ATCGCGGCAT GCCAGCGCTG
GGCCAGTACC GTAGCACCCG TCCGCGGGCC TGGTGGCTGA CGCCAATCGC AATCGTACTG
GTCGTCGGCG CCGGTGCAGT CTGGACCGTG CATGGCTTCC TCGCCCGCCA CGATGCTGAG
GCGAAGGCGC GGCGTGACTC GGTGGCCGAC ACGTCCACGC AAGGCCGCAC TTTCAAGGAT
GCTCCCGCAT CCGCGGTCAT CGCTGCATCG GTACCGGTGC CCGCAAGTGC CGTTGTCGTT
CGTCCTGTGC CGGCTTCGGG TGTGGCTGCC GCCCCGGTTA GCACCCCGCA TACGGCGGCA
CCCCGTAGCT ATTACGACGC GCCCCTGCTG GCCACGGGAG GCGGGCAAGA GGCTGTGGCC
GGACTGCCTG GCGTGCTCGA GGCCGGCAGC GTGGCAGGTG CCGCTTCGTC GGTCGCGGCA
GCCGTGACCG GTGGCGCCGG GGCTCCGGTT GTGGGGCAGG CGGGCGGCGC GCTCGCCCAG
GCACTGACGC CGACAGCGAC GCCGCGCGTG CGCGCCGCCA TGCTCGGCAA TCGCAGCCTC
ACCCTCGCGC AGGGCGCCAA GATCGACTGC GTGGGCGACA CCGCGTTCGA TTCGACCGAG
GCCGGAATTT CGACCTGCAC GGTCACGAAG AACGTGTACT CGGACGACGG GAACGTGCTG
CTGATCGAGC GTGGTTCGCA GATCAACAGC GAGTACCGCT CGAACCTGGC GCCAGGGCAG
AAGCGCGTCT TCGTCCTGTC GGCCCGCATC AAGACCCCGA ATGGCATCAC GGTCGAGATC
GACTCGCCGG CGGCCGATGC GCTCGGCCGG ATGGGCGTCG ATGGCTACGT GAACAACCAC
TGGGGCCAGC GCATTGGTGC GGCGATGCTG CTCGGTATCA CGCAGGACGC GATCGGCTAT
CTGGCCACGC GCGGCGGCAA CAGCAACGGG TCGGTGGTGT TCGAGAACAC GCAGCAGCAG
GGCAACGACA TGGCCACGCG CGTGCTCGAC AGCACTATCA ATATCCCGCC GACCCTGGCG
CAGAACCAGG GCGCAGAATT TACGATCGTC GTTGCACGCG ATCTCGATTT CGGATCGGTC
TATGCCCTGA AGCCGGAGGG CACGCAATGA
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| Protein sequence | MNDDTERNVI EPDDSAGQQP ARNPNGGAVP MSADRGMPAL GQYRSTRPRA WWLTPIAIVL
VVGAGAVWTV HGFLARHDAE AKARRDSVAD TSTQGRTFKD APASAVIAAS VPVPASAVVV
RPVPASGVAA APVSTPHTAA PRSYYDAPLL ATGGGQEAVA GLPGVLEAGS VAGAASSVAA
AVTGGAGAPV VGQAGGALAQ ALTPTATPRV RAAMLGNRSL TLAQGAKIDC VGDTAFDSTE
AGISTCTVTK NVYSDDGNVL LIERGSQINS EYRSNLAPGQ KRVFVLSARI KTPNGITVEI
DSPAADALGR MGVDGYVNNH WGQRIGAAML LGITQDAIGY LATRGGNSNG SVVFENTQQQ
GNDMATRVLD STINIPPTLA QNQGAEFTIV VARDLDFGSV YALKPEGTQ
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