Gene Bxe_A1760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A1760 
Symbol 
ID4004824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp2967067 
End bp2967903 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content63% 
IMG OID637947868 
Productputative type IV secretion system protein VirB9 
Protein accessionYP_559249 
Protein GI91784043 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02781] P-type conjugative transfer protein VirB9 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0566153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.26092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC TTCTTTCCGC GCGTCTGTTC ACGATGGCGC TCGTGGGCCT GCTGTTTTCG 
GGCATGGTCC ACGCGGTCGA CCTGCCGGGC TGGAACGACG ATTCGCGCGT GCGCCAAGTG
ATCTATCACA CGGACGAAGT GGTGCGCGTC GAGGCGCAGC GCGGTTTCGC TACGCATATC
GCGCTCGATC CGCATGAACA GATCCAGATC GTTGCGCCCG GTGACCGGGA CGGTTGGCAG
ATCGTGGCGA ACAAGGGCGA TCACGACGTG TACCTGAAGC CGCAGCTCGC TGCGCACGAT
TCGAATCTCG AGATCCGCAC CGATCGCCGT AGCTACAGCT TCGATCTGGT GGTGCTGCCG
CTCCAGTCGA AATTCGGCAA CGACCGGGTG ATGTACCGCG TGACCTTCGT CTATCCGGAC
GAACTGGCGA AGCAGGCTCA CGAGGATTCG GACGCTGGAC TACTCGCAAA GCGTCTCGCT
CAGCCGCCCG TCGTTCGCAA CGAACGGTAC ACGATGCAGG TCATGGCGGA CTCTGACGAC
ATCGCGCCGA CTGCCGCATG GGACGACGGG CGTTTCACCT ACCTGCGCAT CCCGAACAAC
CGTCGCATGC CGGCGATTTT CCGGGTGGCT GACGACGGCA CGGAAAGCGT GGTCGACAAA
CACGTCGAGG GCGACACGAT TGCCGTGCAT GAAATCGCAA AGCGGTTCGT GCTGCGGCTC
GGCCGCGAGG TCGTCGGGAT CTGGAACGAC GCCTACGACA TGGACGGCGT GCCGCCGCAT
GACGGCACCA CGGTCAGCGG CGTGAAGCGT GTCCTGCGGA GCCCCGGCGA TGAATGA
 
Protein sequence
MKTLLSARLF TMALVGLLFS GMVHAVDLPG WNDDSRVRQV IYHTDEVVRV EAQRGFATHI 
ALDPHEQIQI VAPGDRDGWQ IVANKGDHDV YLKPQLAAHD SNLEIRTDRR SYSFDLVVLP
LQSKFGNDRV MYRVTFVYPD ELAKQAHEDS DAGLLAKRLA QPPVVRNERY TMQVMADSDD
IAPTAAWDDG RFTYLRIPNN RRMPAIFRVA DDGTESVVDK HVEGDTIAVH EIAKRFVLRL
GREVVGIWND AYDMDGVPPH DGTTVSGVKR VLRSPGDE