Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1758 |
Symbol | |
ID | 4004826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 2968815 |
End bp | 2969510 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637947870 |
Product | putative type IV secretion system protein VirB5/TraF |
Protein accession | YP_559251 |
Protein GI | 91784045 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02791] P-type DNA transfer protein VirB5 |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.291545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.256118 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGAC GAAACAGATG GATCGGTGCC GTGTTCGTGC CGGCAATGTG GTGCGTCGGT GCGCACGCGC AGGGCATCCC GGTCTTTGAC GCGCAGAACG TCGCGCAGGC CATCGCGACG GTCGCCCAAC TGGAGCAGCA GGTGCGGCAG GAAATCCAGA TCTACCAGTC GACGGTCGGC ACGCGTGGTT TCGGTGCGCT GATGAGCAAT CCGGTCGTGG CGAAGTCGCT GCCGTCGAAC TGGCAGAGCG TCTATACGGC GATCCAGAAC GGCGGGTACT CGGGCCTGAC GGGTAGCGCA CAGGCGCTGC GTTCGGCTAG CCAGATCTAC AACTGCGAGG ACCAGACCGG GATCGACCAG CAGGTGTGCC AGCGCGCGCT GAGCAAGCCG TTCCAGGACA AGGCGTTCGG GCAGCAGGCG TACCAGACCG AGCTGCAGGA GCTGAACCAG ATCCAGAGCC TCGCGCAGCA GATCGACGTG ACCCAGGACC CGAAGGGCGT CGCCGAACTG CAGGCACGCA TCCAGGCCGA GACCACGACG GTCAACAACG AGATGACCAG ACTGCAACTG TTCCGGATGC TGTCCGAGGC GGAAGACAAG CTCGTGGCTG AGCAGCAGGG CGAGCTGGTG CTGAGTCGCG CGGGCAAAAC CAGCCGGCTC CAGGACCAGA TGGTTCCCGC GTCATTCGGA AACTGA
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Protein sequence | MNGRNRWIGA VFVPAMWCVG AHAQGIPVFD AQNVAQAIAT VAQLEQQVRQ EIQIYQSTVG TRGFGALMSN PVVAKSLPSN WQSVYTAIQN GGYSGLTGSA QALRSASQIY NCEDQTGIDQ QVCQRALSKP FQDKAFGQQA YQTELQELNQ IQSLAQQIDV TQDPKGVAEL QARIQAETTT VNNEMTRLQL FRMLSEAEDK LVAEQQGELV LSRAGKTSRL QDQMVPASFG N
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