| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1756 |
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| Symbol | |
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| ID | 4004828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 2970689 |
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| End bp | 2973181 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637947872 |
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| Product | putative Type IV secretion system protein VirB4/TraE |
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| Protein accession | YP_559253 |
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| Protein GI | 91784047 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.592919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCCT ATCCGCAATT AGTAGCCGTC GCCAACCGGG AAGTACCGCT CTCAGGCTAT
ATCCCGTACT CGACGCACGT CACCGAGCAC GTCATCAAGA CGCGCGAAGG CGACTATCTG
CAGGTCTGGA AGATCGCCGG CATTGCGTTC GAGGCGGCGG ACCCGGCCGA TATACTCGCG
CGGCACGACG GGTTCAACCA GTTCGTACGG GGCCTGGCCG GCGGCCATGT GGCGTTGTGG
TCTCATCGCC TGCGCCGGCG CGTGTCGGAT CGCTTCTCGA CCGAGTACCG CAACCGCTTC
TGCGAGGAAC TGGCGACGCG CTACTACGCG AGCTTCGCCG GCTACCGGAT GATGGCCAAC
GAACTATATC TGACGGTGGT CTACCGGCCG AACCGGACGC GGCTCGGGCG CGTTTTCAGT
CGCGCCGCAC GGCGCACGCG CGACGATATC CGGCGCGACC AGCTGGACGC GCTGAAGGTC
ATGGCCGAGC TGGCCGCGCA GGTCGAATCG AGCCTCAAGC CCTACGATCC GGTCGCGCTC
GGCGTCTATA CGCGGCAAAG CCCCTTCACG CCACACCCGC GCCGCTATTC GTCGGCACTG
GAACTGTTCG GTTATCTGGT GAACGGCGTC TGGGAGCGCG AGCCCGTACC GTCCGGCCCG
ATTCGCGAGG CACTGCCGAC CTCACGCCTG TTCGTCGGTG CCGAGAAGAT CGAGATCCGT
ATGCCGGCCG CAACGCGCTT CGCCGCGATG CTCGACCTGA AGGATTACCC GGAAGACACC
GAACCAGGGA TGCTCAACGG CCTGCTGTAC GGTGACTTCG AGTACATCGA GACGCAGTCG
TTTACGATTC TCGACCGGCC CAGCGCGAAA GAAGCGCTGG AGCGGCAGCG CAACCAGCTG
ATCGCGGGAG AGGACGTCGC TGTGTCGCAG GTCGAGGCGA TGGACCGTGC GCTCGACGAA
CTGGTCAACG GCGATTTTGT GCTTGGCGAA TATCACTATT CGCTGGCCGT GCTCGGGGAC
ACGCTGGATG AGGTGTCCGG TAGCGTGGCG AAGGCCCGCA CGCAACTCGC CGATGCTGGT
TTCCAGACCG CGCTGATCGA CCTCGTCGCC GATGCAGCCT GGTTCGCTCA GCTACCGGGC
AACTGGCGCT ATCGGCCGCG CGAGGCGAAG CTTACCTCGC GCAACTTCTG CGGCCTGTCG
AGCCTGCACA ATTTTGCGAC GGGAAAACGC GACGGCAATC CGTGGGGCGA GGCGATCACC
ATCTTCAAGA CGCCGAGCGG CCAGCCGCTT TATCTGAACT TCCACGTCAC GCCCGACAAG
CAGGATTCGC TCGACGAGAA GGCGCTCGCC AATACGCAGA TCATCGGCCG CGCCGGCGCG
GGCAAGACCG TGCTCGAACT GTTCCTGCTC GCGATGGCGA CGAAGTACGG CATCACGGCC
GTGCTGTTCG ACAAGGACCG CGGCACCGAG ATCGCTATCC GGGCGATGGG CGGCACCTAT
ACGGTGTTCC GTCGCGGCGA GCCGACCGGG CTGAACCCGT TCCAGATGGA ACCGGGCGAA
CCCGTGATCG ACTTCTGGGA GCGCCTGGTC CGCAAGCTCG TCGATATCGG TGTGACGCTG
TCCGCGAAGG ACGAGCTCGA CATTTCGCGC GCGGTGCGCG AAGTCGCGCG CATGGACAAG
CCACTGCGGC GTCTCTCGAT GGTCCGGCAG CTCCTGCCGA ACGTCGGCGA GAACAGCCTG
CATGCGCGGC TCGCGAAATG GTGCGCGGGC GGGCGCCTGG GCTGGGTGTT CGACAACCCG
ACCGACCGCA TCGATCTCGC GCACGCGACG CTGTTCGGCT TCGACGATAC CGAGCTGCTC
GACGACGCGG AGGTCGCCAC GCCTGTCACG ATGTACCTGC TGCACCGGAC CGAAAACCTG
ATCGACGGCC GGCGTTTCGT GTACGTCATG ACCGAATTCT GGAAGCGTCT CGGCGATCCG
GTCTTCACCG ATTTTGCCCA GAACAAGCAG AAGACGATAC GCAAGCAGAA CGGGCTTGGG
ATCTTCGACA CGCAGTCGCC GGCCGATGTG CTGCGCAGTC CGATCGCCAG TGCGCTGATT
GAGCAGAGCG CGACGTTCTT CTTCCTGCCG AACCCGCGCG CCGATTATGA CGACTACGTG
CGCGGCTTCA AGCTGACCGA GGCCGAATTC AACATCGTGC GCAACCTTGG CGAGAACAGC
CGCATGTTCC TCGTCAAGCA GGGGCATCGG TCGGCCATCG GCCGGCTCGA TCTCGCGGGT
CTCGGCGACG TGCTCGACGT ACTGTCCGGC ACGATCGACA ACGTGGAGTT GCTTGACACG
ATCCGCGCCC AGGTCGGCGA CCTGCCGCAG AACTGGGTGC CCGCCTTTCA CGAGCAGTTG
GCGAAGCGCC GAGCGGCGCA GTCAGAACAG GCCAGTGCGC GCCAGTCGAA GCAGTTGCCA
GGGCCGGAGT CAGGGCAGGG AGGTGTGCGA TGA
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| Protein sequence | MPAYPQLVAV ANREVPLSGY IPYSTHVTEH VIKTREGDYL QVWKIAGIAF EAADPADILA
RHDGFNQFVR GLAGGHVALW SHRLRRRVSD RFSTEYRNRF CEELATRYYA SFAGYRMMAN
ELYLTVVYRP NRTRLGRVFS RAARRTRDDI RRDQLDALKV MAELAAQVES SLKPYDPVAL
GVYTRQSPFT PHPRRYSSAL ELFGYLVNGV WEREPVPSGP IREALPTSRL FVGAEKIEIR
MPAATRFAAM LDLKDYPEDT EPGMLNGLLY GDFEYIETQS FTILDRPSAK EALERQRNQL
IAGEDVAVSQ VEAMDRALDE LVNGDFVLGE YHYSLAVLGD TLDEVSGSVA KARTQLADAG
FQTALIDLVA DAAWFAQLPG NWRYRPREAK LTSRNFCGLS SLHNFATGKR DGNPWGEAIT
IFKTPSGQPL YLNFHVTPDK QDSLDEKALA NTQIIGRAGA GKTVLELFLL AMATKYGITA
VLFDKDRGTE IAIRAMGGTY TVFRRGEPTG LNPFQMEPGE PVIDFWERLV RKLVDIGVTL
SAKDELDISR AVREVARMDK PLRRLSMVRQ LLPNVGENSL HARLAKWCAG GRLGWVFDNP
TDRIDLAHAT LFGFDDTELL DDAEVATPVT MYLLHRTENL IDGRRFVYVM TEFWKRLGDP
VFTDFAQNKQ KTIRKQNGLG IFDTQSPADV LRSPIASALI EQSATFFFLP NPRADYDDYV
RGFKLTEAEF NIVRNLGENS RMFLVKQGHR SAIGRLDLAG LGDVLDVLSG TIDNVELLDT
IRAQVGDLPQ NWVPAFHEQL AKRRAAQSEQ ASARQSKQLP GPESGQGGVR
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