| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1743 |
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| Symbol | |
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| ID | 4005189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 2982093 |
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| End bp | 2985347 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637947885 |
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| Product | RND family hydrophobe/amphiphile efflux pump |
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| Protein accession | YP_559266 |
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| Protein GI | 91784060 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.134866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.952788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGAT TTTTTATCGA TCGCCCCGTC TTTGCATGGG TGATCCCGAT TCTGATCTGC
ATCATCGGTG TCATTTCGAT GATGCATCTT GGCATCGACT CTTATCCGGA CGTCGCACCA
CCTCAGGTCA CCGTAACGGC CACGTATCCT GGCGCGAATG CCGCGACCAT GGAATCGACT
GTGACCCAGG TGATCGAGCA GCAGCTCACC GGCATCGACA ACCTGCTATA TTTCAGTTCT
ACCTCGAACT CCAACGGCAC CGTCACAATC ACCTTGAGTT TCGAGACCGG CACAAATCCG
GACATTGCGG AAGTGCAGGT TCAGAACAAG GTCAATCTGG CCCAACCGCT GCTGCCGGCC
CAGGTGACAC AGCAGGGTGT GGTCGTCGCC AAGGCGAGTC CGGACATCTT GATGTTCCTT
TCCCTGCAGT CGAGCAATCC GGCCATTGAC GCCGCGCGCC TGAACGATAT CATCGCGTCG
CAGATCCAGC CGGTGATCGC ACGGGTCAAT GGCGTTGGTA ACACGCTCTC GCTGGGCTCT
GAATACGCCG TGCGCATCTG GCTGAATCCG GACAAGCTAC AAGGGTATGG CCTGTCGACC
ACCCAGGTGC TCCACGCTGT AAGTGCCCAG AACGCGCAGT TCGCAACGGG CTCGCTCGGT
TCCGATCCGG CCGTGAAGGG GCAAGTGCTT ACTGCTTCGG TATCAGGTGA CACGCTCTTC
TCTTCACTGA AGCAGTTTCG CGACATCATC CTGTTGACCA ACAGCAACGG CACCGTGGTC
AGGTTAAGCG ATGTTGCACG CATCACTTTC GGTGCGCAAA GCTACGGCTT GGCCTCTGTC
TATCAGGGCA AAGCGGCCGG CGGCATGGGC ATCTATCTGC TGCCGGGCGC CAATGCGCTT
GCGGTGGCCA AAGCGGTGAA GGCCGAAATG GCTACACTCG CCAAGGATCT TCCGGCTGGC
GTCACCTGGA ATGTGCCTTA TGACACGACG CCGTTTATTT CGGCTTCGAT CGCCGATGTG
GTGCGCACGC TGCTGGAGGC GATTGCGCTC GTCTTTGTGG TGATGCTGAT CTTCCTGCAG
AACCTGCGCG CCACCATTAT TCCGACCCTC GTGATCCCTG TGGCGCTGCT GGGTACCTTT
ATCGGCCTCT CGGCGCTGCA CTTCACACTC AATCAGCTGA CCCTGTTCGG GATGGTGCTG
GCAATCGGCA TTGTGGTGGA CGATGCGATC GTCGTGATCG AGAACGTCGA GCGCATCATG
AGCGAGGAAC ATCTCGAACC CAAAGAGGCT ACCCGCAAGG CGATGGGGCA GATTACCGGT
GCCATTCTCG CAATCACCGT GGTGTTGGCC GCCGTGTTCA TTCCGTCGGC GTTACAGCCG
GGAGCCACCG GCATCATCTA CGCTCAGTTT GCGTTGACTA TTGCGGTTTC GATGTTGGTG
TCGGCGTTCC TTGCCATGTC GTTCACGCCG GCGCTCTGCG CGGCGATTCT CAAGCCCACG
CACGTAGAGA AAAAGAACTT CATTTTCCGC TGGTTCGACA AGGGGCTTGC GCGGATCAAC
GAGCGTTACG CGCGCCAGAT CGGCGGTGCG GTACGTCACG CGCCGCGCTG GATGGTGGTG
TTTGTATTGC TCTCCGTGCT GGCTGGGTTT CTATATGTGC ATCTGCCGAC CAGCTTCGTG
CCGGATGAGG ATCAGGGTTT CATGCTCGCA CTCGTCAATC TGCCAACTGG CGCCACGCTC
CAGCGTACCG AAGAAGTCAT GGACGCGATG TCGGACAGGC TCAAACATAG CCCGATTGGC
AGGGACATCG CTGGTGTTTA CCAGGTGGAA GGCTACAGCT TCGTGGGCAG TAGCGAAAAC
GTGGGGATGG CGTTTATCCA GTTGACCGAC TGGGACAAGC GCTCCGAGAG CGCGATGCAG
CTCATTCCGC AGGCGAACCG TATATTGCAT GGACTCCAGG ACGCGCGCGT CTTCGTCGTC
GATCTTCCCA CCATCCGCGG GTTGAGCCAA TTCGGCGGAA TCGACATGTA CCTGCAGGCT
CGTGCGGGTC AGTCGCGCGC GGAACTGGCG CAGGCCGGAC GCGTTCTGCT TGGTAATGCC
GCAAAAAACG CGACGCTGTA TGGCGTTCGG CCCAATTCGC TTCCCGATGC GCAGCAACTT
GAGATGTCCG TCGATCGCGT GCAGGCGCAA GCAATGGGGC TCTCGCTGAC CGATGTCTAT
AACGCCATCC AGATGGAGCT GGCTCCGTAC TATGTGAACC AGTTCACCTA TGCGGGTCGT
GTCAAGCGCG TGTATCTGCA GGCCGATGCA CCGTACCGGA TGGGGATCGA CGCGTTCCAG
CATATCTACA CGCCCAGCGG GATCAGCAGC GCGTCAACCG GTGCCACTAG TACTTCTGGC
GAAACCACCA ACACCAGCGG GTACCTGACC CAGGTCAACC CGACGGCGAC CAATAGTTCG
CTGAGTCCGT ACAACATGGT TCCGTTGTCG AGCGTGGTGA AAACACATTG GGATGTTGGT
CCCGTCGCAT TGCCGCGTTA TAACGGCTAT TCGGCCATTG AGATTGTGGG CAATCCCGCG
CCTGGCTATT CGACCGGGCA GGCCATGCAG ACACTGCAGC ATATTGTCGA TACTCGGCTG
CCACCGGGCT TCGCCGCGGA CTGGACCGGT CAGTCCTACC AGGAAGTTCT CTCTGGCAAT
TCGGCGACGT TGCTGATGAT TCTGTCGATC GTCGTGGTAT TCCTGTGCCT CGCGGCACTC
TATGAGAGCT GGTCGATACC GGTGGCCGTT CTGCTCGTGG TTCCGCTCGG TATGCTCGGC
ATGCTGACCT TCTGTCTGCT ACGTGGCATT CCAAATGACA TTTACTTCAA GATTGGTCTG
GTGACCGTGA TTGGCCTTGC AGCAAAGAAT GCGATTCTCA TTGTCGAATT CGCCGTCGAC
GGACAGGCCA GGGGCATGAC TTTATACGAC GCTGTGTTGA CGGCCGGAAA GTTGCGGCTG
CGACCGATCC TGATGACATC GATGGCCTTC ATCCTCGGGG TTTTCCCACT CGTGATTTCT
ACCGGAGCGG GAGCGTCATC CCGGCACGAA ATCGGTACAG GGGTAATAGG CGGAATGTTG
TTCGCGACCG TCCTCGGTTT GCTGCTGATC CCTGTGTTCT ACGTGGTGGT GCGGCGTATT
CTCGGGGACA AGCTCGATGA GATCCCTAAC AGGTTGCCGC ACGGTGGCAA CGACCGGACA
GACATCGTCG CATGA
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| Protein sequence | MPRFFIDRPV FAWVIPILIC IIGVISMMHL GIDSYPDVAP PQVTVTATYP GANAATMEST
VTQVIEQQLT GIDNLLYFSS TSNSNGTVTI TLSFETGTNP DIAEVQVQNK VNLAQPLLPA
QVTQQGVVVA KASPDILMFL SLQSSNPAID AARLNDIIAS QIQPVIARVN GVGNTLSLGS
EYAVRIWLNP DKLQGYGLST TQVLHAVSAQ NAQFATGSLG SDPAVKGQVL TASVSGDTLF
SSLKQFRDII LLTNSNGTVV RLSDVARITF GAQSYGLASV YQGKAAGGMG IYLLPGANAL
AVAKAVKAEM ATLAKDLPAG VTWNVPYDTT PFISASIADV VRTLLEAIAL VFVVMLIFLQ
NLRATIIPTL VIPVALLGTF IGLSALHFTL NQLTLFGMVL AIGIVVDDAI VVIENVERIM
SEEHLEPKEA TRKAMGQITG AILAITVVLA AVFIPSALQP GATGIIYAQF ALTIAVSMLV
SAFLAMSFTP ALCAAILKPT HVEKKNFIFR WFDKGLARIN ERYARQIGGA VRHAPRWMVV
FVLLSVLAGF LYVHLPTSFV PDEDQGFMLA LVNLPTGATL QRTEEVMDAM SDRLKHSPIG
RDIAGVYQVE GYSFVGSSEN VGMAFIQLTD WDKRSESAMQ LIPQANRILH GLQDARVFVV
DLPTIRGLSQ FGGIDMYLQA RAGQSRAELA QAGRVLLGNA AKNATLYGVR PNSLPDAQQL
EMSVDRVQAQ AMGLSLTDVY NAIQMELAPY YVNQFTYAGR VKRVYLQADA PYRMGIDAFQ
HIYTPSGISS ASTGATSTSG ETTNTSGYLT QVNPTATNSS LSPYNMVPLS SVVKTHWDVG
PVALPRYNGY SAIEIVGNPA PGYSTGQAMQ TLQHIVDTRL PPGFAADWTG QSYQEVLSGN
SATLLMILSI VVVFLCLAAL YESWSIPVAV LLVVPLGMLG MLTFCLLRGI PNDIYFKIGL
VTVIGLAAKN AILIVEFAVD GQARGMTLYD AVLTAGKLRL RPILMTSMAF ILGVFPLVIS
TGAGASSRHE IGTGVIGGML FATVLGLLLI PVFYVVVRRI LGDKLDEIPN RLPHGGNDRT
DIVA
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