| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1742 |
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| Symbol | |
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| ID | 4005190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 2985360 |
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| End bp | 2986571 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637947886 |
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| Product | RND efflux system membrane fusion protein |
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| Protein accession | YP_559267 |
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| Protein GI | 91784061 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0860359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.290427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAC TACCGTTGCT GTGCGTTGTC CTTTTCATAC TGTCAGCGCT TTCCGGCTGC
GCAAAATCCA GTCACAGCTC GGCAGCTCCG CGGCCGCAGG TCGGCGTGAT CACCGTCCAG
CCGCAGAGTG TTGCCCTGAC GCGCCATCTG GTCGGACGTC TTGCGCCATA TCTCAGCGCC
AACGTCACGG CGCGCGTGTC CGGTGTCCTG ACCAAACGGG TCTATAAGGA AGGTACCGAC
GTCCAGGCCG GACAGGTGCT CTTCGAGATC GATCCTGCGT ACTATCAGGC GCAGCTCAAC
AACGACCTCG GCATCCTCGG CGAAGATCGG GCTACCTGGA TGAACGACAA GGTCAACGCG
GCGCGTTATC ACCAGCTGCT GCCGGTCGGC TCCGTGTCGC AACAGACAGT TGACAACGCC
GATGCGACAG TGCGCAGTGA CGCGGCTAAA GTCAAGGCCG ATGAGGCGAT GGTGGAAAGC
GCGAAGGTCA ACCTCGGCTA TACCAAGGTG ACCTCGCCGA TCCGCGGCAT TGCCGGTCAG
CAGCTAGTGA CCGTCGGCGC CCTCGTGGGT AGCGGTACCT CCGATGCTGG CTCCGGCGGC
ACCTTGCTTA CCACCGTGAA CGACATTGAC CAGCTCTACG TGAACTTCAC CTTGAGCGCC
GCGGATCTGC TGATGCTGCG AGAAGCAGGT GCCCGCGGCG ACGTCGCGCT CGCCGAGCCA
GACAGGACGA CCGTGCAGAT CACGCTGCCA GACGGCAGCG CGTACGCCCA ACTGGCCACC
CTCGACTTCT CCGACGTCTC CGTGAATGCC ACTACGGGTG CGGTCAATCT GCGTGCACTG
GTACCGAACC CTCAGCGCAC GATACTCCCG GGCATGTATG TGACGTTGAA CGTGACCTTG
GGCCAACAGC GCAACGTGTT CCTGGTGCCA CAGGAGTCGC TTCAGCGTGA CACCGTAGGC
GCTTATGTAT TCGTTGCCGA TGCGAGCGGC AAGGTGGCGC GCGAGGATGT GGCCGCCAAC
GACAGCTTGG GCACCAACTG GATCGTTACC ACAGGCCTTA CGGCCGGCGA TCAGGTGATT
GTCTCCGGTC TGCAAGGCCT GCATGAGGGC GATCCTGTCA AGTCTCATCC ATGGCATGCG
CCGTCGGCGG CCGCGCCGCA AGACGGATCA GCATTGGCTG CAGGCAGCCG GACTGCCGTC
AACGCACACT AA
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| Protein sequence | MKSLPLLCVV LFILSALSGC AKSSHSSAAP RPQVGVITVQ PQSVALTRHL VGRLAPYLSA
NVTARVSGVL TKRVYKEGTD VQAGQVLFEI DPAYYQAQLN NDLGILGEDR ATWMNDKVNA
ARYHQLLPVG SVSQQTVDNA DATVRSDAAK VKADEAMVES AKVNLGYTKV TSPIRGIAGQ
QLVTVGALVG SGTSDAGSGG TLLTTVNDID QLYVNFTLSA ADLLMLREAG ARGDVALAEP
DRTTVQITLP DGSAYAQLAT LDFSDVSVNA TTGAVNLRAL VPNPQRTILP GMYVTLNVTL
GQQRNVFLVP QESLQRDTVG AYVFVADASG KVAREDVAAN DSLGTNWIVT TGLTAGDQVI
VSGLQGLHEG DPVKSHPWHA PSAAAPQDGS ALAAGSRTAV NAH
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