| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1677 |
|---|
| Symbol | |
|---|
| ID | 4003352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 3053766 |
|---|
| End bp | 3054299 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637947949 |
|---|
| Product | peptide deformylase |
|---|
| Protein accession | YP_559330 |
|---|
| Protein GI | 91784124 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
|---|
| TIGRFAM ID | [TIGR00079] peptide deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0206244 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0509785 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCG AAATTCTCAA GATGGGCGAT CCGCGCCTGT TGCGCATTGC CGATCCGGTC
GATCACTTCG ACACGCCCGA ACTGCATGAA CTCGTGAAGG ACATGTTCGA GACCATGCAC
GACGCCAACG GCGCGGGCCT CGCCGCGCCG CAGATCGGCG TCAATCTGCA GGTGGTGATC
TTCGGCTTCG GCCACAACGA ACGCTATCCG GACGCGCCGC CGGTGCCCGA AACCGTGCTG
ATCAACCCGA CCATCACGCC GGTCTCGCAG GACATGGAAG AGGGCTGGGA GGGTTGCCTG
TCGGTGCCGG GCCTGCGCGG CGCGGTGAGC CGGTTTTCGA TGATCAAGTA TCACGGTTTC
GACCAATACG GCAAACCGAT CGATCGCGTC GCGGAAGGTT TTCATGCGCG CGTCGTGCAG
CATGAATGCG ATCACCTGAT CGGCAAGTTG TATCCAATGC GGATCAACGA CTTCGCGAAG
TTCGGCTTCA CGGAAGTGCT GTTTCCGGAT ATGGATCCGA ATAGCGACGA CTGA
|
|---|
| Protein sequence | MIREILKMGD PRLLRIADPV DHFDTPELHE LVKDMFETMH DANGAGLAAP QIGVNLQVVI
FGFGHNERYP DAPPVPETVL INPTITPVSQ DMEEGWEGCL SVPGLRGAVS RFSMIKYHGF
DQYGKPIDRV AEGFHARVVQ HECDHLIGKL YPMRINDFAK FGFTEVLFPD MDPNSDD
|
|---|
| |