| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1674 |
|---|
| Symbol | |
|---|
| ID | 4003355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 3057982 |
|---|
| End bp | 3061578 |
|---|
| Gene Length | 3597 bp |
|---|
| Protein Length | 1198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637947952 |
|---|
| Product | chromosome segregation protein SMC |
|---|
| Protein accession | YP_559333 |
|---|
| Protein GI | 91784127 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0693113 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0408996 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGCTCT ATCGGCGAAC GGCTGGCGCG GCCTTCACGA GCCACCCATT TTTTCCCTTT
TCAAACAGCG AAATCGCCGT GCGTCTGACC TCGATCAAAC TCGCTGGCTT CAAGTCATTC
GTCGATCCCA CGCATTTCCA GGTTCCGGGC CAGCTAGTCG GCGTGGTCGG ACCGAACGGG
TGCGGCAAGT CCAACATCAT CGACGCCGTG CGCTGGGTGC TCGGCGAATC GCGCGCCTCC
GAACTGCGCG GCGAGTCGAT GCAGGACGTG ATCTTCAATG GCTCGACCGC GCGCAAGCCC
GGCAGCCGCG CCAGCGTCGA ACTGGTGTTC GACAACGCCG ACGGCCGGGC CGCGGGCCAG
TGGGGCCAGT ATGCCGAAAT CGCCGTCAAG CGCGTGCTCA CGCGCGACGG CACCTCGAGC
TACTACATCA ACAATTTGCC GGCGCGTCGC CGCGACATTC AGGACATCTT CCTCGGCACC
GGTCTCGGGC CGCGCGCATA CGCGATCATC GGGCAGGGCA TGATCGCGCG CCTGATCGAG
GCGAAGCCGG AAGAGCTGCG CGTGTTCCTC GAAGAAGCCG CGGGTGTGTC GAAGTACAAG
GAACGCCGCC GCGAAACCGA AAACCGTCTG CACGACACGC GCGAAAATCT GACACGGGTC
GAGGACATCG TCCGTGAACT GGGCGCGAAC CTCGAGAAGC TGGAAGCGCA GGCCGTGGTC
GCCACGCGTT ACAAGGAACT GCAGGCCGAC GGCGAAGAGA AGCAGCGGCT CTTGTGGCTA
TTGCGCAAGA ACGAAGCCGG TGGCGAGCAG GAACGCCAGC AGCGCGCGAT CGAACAGGCC
CAGATCGACC TCGAAGCGCA CACCGCGAAG CTGCGCGAAG TCGAAGCGCA ACTCGAAACG
CTGCGCGTCG CGCATTATTC CGCGAGCGAC GCAATGCAGG GCGCGCAAGG CGCGCTCTAC
GAGGCGAATT CGGAAGTCAG CCGGCTCGAA GCCGAGATCA AGTTCATCGT CGAATCGCGC
AATCGGGTGC AGGCGCAGAT CGCCGCGCTG AACGCGCAGC GTGAGCAATG GCAGTCGCAG
GCGCAAAAAG CGCAAGACGA TCTCGCGGAC GCCGAAGAAC AACTGGCGGT GGCCGAAGAA
AAAGCCACAC TGGTCGAAGA CGAAGCCGCT GCCAAACACG ACGCGATGCC CGCGCTCGAA
GCTCGCTGGC GCGACGCGCA AACCGAACTG AACGCCGAGC GTGGCGGGAT CGCTCAGACC
GAACAGGCGC TCAAGCTCGA AGCCGCGCAT CAGCGCAATG CCGATCAGCA ATTGCAGCAA
CTGCAGGCGC GTCACGAGCG GTTGAAGTCG GAAGCGGGCG GTCTCGACGC ACCCGACGAA
GCGCAGCTCG AAGACCTGCG CATGCAGCTT GCCGAGCACG AGGAAATCCT GCACGACGCG
CAAACGCGTC TGGCCGACGC GCAGGAAACG CTGCCGCGCC TCGACGGCGA GCGCCGCGCA
GCGCAGGAGC GCGTGCAGGC GGAAAGCTCG CAGATTCATC AGCTCGACGC GCGCCTTGCC
GCGCTCAAGC AGTTGCAGGA AAACGTCCAG ACCGAAGGCA AGATCCAGCC GTGGCTCGAA
AAGCACGAGC TGAACGGCCT GCCGCGTCTG TGGAAGAAAC TGCATGTCGA AGCCGGTTGG
GAAGCCGCGC TCGAAGCCGT GCTGCGCGAG CGGCTCGCCG CGCTCGAAGT GTCGAACCTC
GACTGGGTCA AGGCCTTCGC CACCGACGCG CCGCCCGCCA AGCTCGCTTT TTACGCGCCG
CCTGTCGCCG GTCAGCCTGC CGCCACGCCG CCTGCGCTGC GGCCGCTGCT GTCGCTGGTG
CGGATCGACG ACGCGGGCAT CCGCGCGGTG CTGAACGACT GGCTCGGCCT TTCGTTCGTC
GCCGACGATC TGCAGCAGGC GCTCGCCATG CGCTCGCAAT TGCCGGAAGG CGGCTCGTTC
GTCGTCAAGG CGGGGCATGT GGTGACGCGC GTCGGCGTCC AGCTGTATGC CGCCGACTCC
GAGCAGGCCG GCATGCTGGC CCGTCAGCAG GAAATCGAAA ATCTCGCGCG TCAGGTTCGC
GCCCAGGCGT TGCTCGCGGA CGAAGCGAAA GCCGCCGCGA TCCGCGCCGA AGCCGCACAC
ACGCAGGCCG CGCAGGCATT GACCGACGTG CGCCAGCAGG CGGAGCGCGC CACGCAGCGC
GTGCACGCGT TGCAAATGGA CGTGCTCAAA CTCACCCAGG CGCACGAGCG TTACACCCAG
CGCAGCACGC AGATTCGCGA GGAACTTGCA GAGATCACCG CGCAGATCGA AGAGCAGCGC
GCCATGCGCG CGGAGTCGGA AGCGAACTTC GAGCGTCATG ACGGTGAGCT CGCCGAACTG
CAGGCGCGTT TCGAAGATCA TCAACTGGCG TTCGAAGCGC TCGACGAAGA ACTCACCGCC
GCGCGCGGCC AGGCGCGCGA TCTGGACCGT GCCGCTACCG ACGCGCGCTT TGCCGCGCGC
AACATGGCGA ACCGCATCGA CGAACTGAAG CGCAGCATTC AGGTCGCGCA CGAGCAGAGC
GAGCGTGTCG CGGCGTCGCT GGAAGACGCG CGCGCCGAGC TGGAAACCAT CAACGAGCAG
ACCGCGCACA CCGGCTTGCA GGACGCGCTC GATATTCGCG CCGTCAAGGA AGAAGCGCTG
CACGCCGCGC GCCTCGAACT GGACGATCTC ACCGCCAAGC TGCGTGCCGC CGACGAAACG
CGTCTGACGG CCGAGCGCGC GTTGCAGCCG CTGCGCGACC GCATCAATGA ACTGCAGTTG
AAGGAACAGG CGGCGCGCCT GAACGGCGAG CAGTTCATCG AGCAACTTGC CGCGGCCGGC
GTCGATGAGG CGCAGTTGCA GGCCAAGCTC ACGCCGGACA TGAAGCCGTC GTATTTGCAG
GGCGAAGTCA CGCGCATCAA CAACGCCATC ACCGCGCTCG GCCCGGTCAA CATGGCCGCG
CTCGACGAAC TGAAGGCGGC GACCGAGCGC AAGTCGTTCC TCGACGCGCA GTCCACCGAT
CTGAACAGCG CGATCGAAAC GCTCGAAGAC GCCATCCGCA AGATCGACGC GGAAACGCGC
ACGCTGCTGC AAGGCACCTT CGATCAGGTG AACCAGCATT TCGGCGAACT GTTCCCGCGT
CTGTTCGGCG GCGGCCAGGC GAAGCTGATC ATGACCGGCG ACGAAATTCT CGACGCCGGC
GTGCAGGTGA TGGCGCAGCC GCCGGGCAAG AAGAATTCGA CGATTCACCT GCTCTCGGGC
GGCGAAAAAG CGCTGACCGC CACCGCGCTG GTGTTCGCGA TGTTCCAGCT GAACCCCGCG
CCGTTCTGTC TGCTCGACGA AGTGGACGCG CCGCTCGACG ACGCCAACAC GGAACGTTTC
GCGAACCTCG TGCGGGCGAT GTCGGACAAA ACCCAGTTCC TGTTCATCTC GCACAACAAG
ATCGCGATGG AAATGGCGCA GCAATTGATC GGCGTGACCA TGCAGGAGCA GGGCGTGTCG
CGCATCGTGG CCGTCGACAT GGAAACGGCC GCGGGTTTCG CCCAGAATAT CGTTTGA
|
|---|
| Protein sequence | MSLYRRTAGA AFTSHPFFPF SNSEIAVRLT SIKLAGFKSF VDPTHFQVPG QLVGVVGPNG
CGKSNIIDAV RWVLGESRAS ELRGESMQDV IFNGSTARKP GSRASVELVF DNADGRAAGQ
WGQYAEIAVK RVLTRDGTSS YYINNLPARR RDIQDIFLGT GLGPRAYAII GQGMIARLIE
AKPEELRVFL EEAAGVSKYK ERRRETENRL HDTRENLTRV EDIVRELGAN LEKLEAQAVV
ATRYKELQAD GEEKQRLLWL LRKNEAGGEQ ERQQRAIEQA QIDLEAHTAK LREVEAQLET
LRVAHYSASD AMQGAQGALY EANSEVSRLE AEIKFIVESR NRVQAQIAAL NAQREQWQSQ
AQKAQDDLAD AEEQLAVAEE KATLVEDEAA AKHDAMPALE ARWRDAQTEL NAERGGIAQT
EQALKLEAAH QRNADQQLQQ LQARHERLKS EAGGLDAPDE AQLEDLRMQL AEHEEILHDA
QTRLADAQET LPRLDGERRA AQERVQAESS QIHQLDARLA ALKQLQENVQ TEGKIQPWLE
KHELNGLPRL WKKLHVEAGW EAALEAVLRE RLAALEVSNL DWVKAFATDA PPAKLAFYAP
PVAGQPAATP PALRPLLSLV RIDDAGIRAV LNDWLGLSFV ADDLQQALAM RSQLPEGGSF
VVKAGHVVTR VGVQLYAADS EQAGMLARQQ EIENLARQVR AQALLADEAK AAAIRAEAAH
TQAAQALTDV RQQAERATQR VHALQMDVLK LTQAHERYTQ RSTQIREELA EITAQIEEQR
AMRAESEANF ERHDGELAEL QARFEDHQLA FEALDEELTA ARGQARDLDR AATDARFAAR
NMANRIDELK RSIQVAHEQS ERVAASLEDA RAELETINEQ TAHTGLQDAL DIRAVKEEAL
HAARLELDDL TAKLRAADET RLTAERALQP LRDRINELQL KEQAARLNGE QFIEQLAAAG
VDEAQLQAKL TPDMKPSYLQ GEVTRINNAI TALGPVNMAA LDELKAATER KSFLDAQSTD
LNSAIETLED AIRKIDAETR TLLQGTFDQV NQHFGELFPR LFGGGQAKLI MTGDEILDAG
VQVMAQPPGK KNSTIHLLSG GEKALTATAL VFAMFQLNPA PFCLLDEVDA PLDDANTERF
ANLVRAMSDK TQFLFISHNK IAMEMAQQLI GVTMQEQGVS RIVAVDMETA AGFAQNIV
|
|---|
| |