| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1668 |
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| Symbol | |
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| ID | 4003361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 3065768 |
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| End bp | 3066973 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637947958 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_559339 |
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| Protein GI | 91784133 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.154111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0474135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGGCTG CGGTGTTCAA CCGCCAGCCG GCATTTTTTC ATTTCAAAGT GGCTTGTATC
GAATCCATGT CCGGCACCCT CGCCCTTACC GAACAACTGA TCGCGCGCGC GTCCGTCACG
CCCGACGACC AGCATTGCCA GCGCCTCCTG ATCGAACGCC TGGCCGCGCT CGGCTTCGAG
CACGAGACGA TCGAATCGAA CGGCGTCACC AATCTGTGGG CCGTCAAACG CGGCGTCGAC
GGCACCGCGG GCAAGCTGCT CGCGTTCGCC GGCCATACCG ACGTGGTGCC GACCGGCCCG
CTCGAACAAT GGCACTCGGC GCCGTTCGAG CCGACCCATC GCGACGGCAA GCTGTACGGC
CGCGGCGCGG CGGACATGAA AGCGTCGATC GCGGGCTTCG TGGTGGCGAG CGAGGAGTTC
GTCGCCGCGC ACCCGGCGCA CCGCGGCTCG ATCGCCTTCC TGATCACGAG CGACGAAGAA
GGCCCCGCCA CCGACGGCAC CATCAAGGTC GTCGAGGCCT TGCAGGCGCG CGGCGAGCGC
ATGGACTACT GCATCGTCGG CGAACCGACG TCGAGTGCGC GGCTCGGCGA CATGGTGAAG
AACGGCCGGC GCGGCTCGAT GTCGGGCAAG CTGATCGTCA AGGGCGTGCA AGGCCATATC
GCCTATCCGC ATCTGGCGAA AAATCCGGTG CATCTGCTCG CGCCCGCGCT CGCCGAGCTG
GTCGCCGAGC GCTGGGACGA CGGCAACGAA TATTTCCCGC CCACCACGTG GCAGGTGTCG
AACATTCACA GCGGCACCGG GGCGACCAAC GTGATTGCCG GCCATGCGGA CGTGATGTTC
AACTTCCGCT TCTCGACGGC GAGCACGGTG GAAGGGTTGC AGGCCCGCGT CCACGCGATC
CTCGACAAAC ACAAGCTCGA CTACGATCTG CAATGGACCG TGAGCGGCCT GCCGTTCCTC
ACGCCGCGCG GCGATCTGTC GAACGCGCTC GCCGCGGCGA TCAGGGACGA AACCGGCGTC
ACCACCGAAC TGTCGACCAC CGGCGGCACC TCGGACGGCC GCTTCATTGC GCGCATCTGC
CCGCAGGTGA TCGAATTCGG CCCGCTGAAC GCCAGCATCC ACAAGACCGA CGAACATATC
GAAGTCGCAC ACATCGAGCC GCTGAAGAAC GTGTATCGCC GCGTGCTCGA ACAACTGATT
GCGTGA
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| Protein sequence | MPAAVFNRQP AFFHFKVACI ESMSGTLALT EQLIARASVT PDDQHCQRLL IERLAALGFE
HETIESNGVT NLWAVKRGVD GTAGKLLAFA GHTDVVPTGP LEQWHSAPFE PTHRDGKLYG
RGAADMKASI AGFVVASEEF VAAHPAHRGS IAFLITSDEE GPATDGTIKV VEALQARGER
MDYCIVGEPT SSARLGDMVK NGRRGSMSGK LIVKGVQGHI AYPHLAKNPV HLLAPALAEL
VAERWDDGNE YFPPTTWQVS NIHSGTGATN VIAGHADVMF NFRFSTASTV EGLQARVHAI
LDKHKLDYDL QWTVSGLPFL TPRGDLSNAL AAAIRDETGV TTELSTTGGT SDGRFIARIC
PQVIEFGPLN ASIHKTDEHI EVAHIEPLKN VYRRVLEQLI A
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