| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1600 |
|---|
| Symbol | |
|---|
| ID | 4003514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 3145090 |
|---|
| End bp | 3146304 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637948032 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_559407 |
|---|
| Protein GI | 91784201 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2262] GTPases |
|---|
| TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0793347 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.128476 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCGATTA CTCCCGGCCG CCTCATTTTG ATATCCTCCA ATTTGATCAA TGCAGCGCTT
GTCGGCATCG ACTTCGGTAA GATCGATTTC GAAGCCAGTC TCGAAGAACT CAGCCTGCTC
GCGCAAAGCG CGGGCGCGAA TCCCTTAGTC ACCCTCACCG GGCGCCGGTC CAGTCCCGAC
GCCAAGATGT TCGTCGGCAG CGGCAAGGCC GAAGAACTGC GTCTTGCGTG TGAGGCGAAC
GACATCGAAC TCGTCATTTT CAATCATGCT CTGGCGCCCG CGCAGCAGCG GAATCTGGAG
CAGGCGCTTA ACCGGCGCGT GATCGATCGC ACCAGTCTGA TCCTCGACAT TTTTGCGCAA
CGCGCCCGCA GCCATGAAGG CAAACTGCAG GTGGAGCTCG CGCAGTTGCA GTACCTTTCC
ACGCGACTAA TCCGCGCATG GACCCACCTT GAGCGGCAAA AAGGCGGTAT CGGTTTGCGC
GGCCCGGGTG AAACGCAGCT CGAAACCGAC CGCCGTTTGA TCGGCGAGCG CATCAAGGCG
CTCAAGACGC GGCTCGAGAA ATTGCGCCGT CAGCACGGCA CGCAGCGTCG TGCGCGCAGC
CGCAATCAGA CCATGTCCGT ATCGCTCGTC GGTTACACGA ACGCGGGCAA ATCCACGCTG
TTCAACGCGC TCACGAAGGC CCAGGCGTAC GCCGCCGACC AGTTGTTCGC GACGCTGGAT
ACGACCTCGC GGCGCGTCTA TCTCGGCGAC GAAGCGGGGC AGGTGGTGGT GTCGGATACG
GTCGGTTTCA TCCGCGAATT GCCTCACCAG CTGGTGGCGG CGTTTCGCGC CACGCTCGAA
GAAACGATTC ACGCCGATCT GCTTCTGCAC GTGGTCGATG CGTCGAGCGC GGTGCGGCTC
GACCAGATCG ATCAGGTGAA CGAGGTGTTG CACGCAATCG GTGCGGACAC CATCCGGCAG
GTGCTGGTCT TCAACAAGAT CGACGCGGTG CCGGAGTTGG CAGCCCGTGG GGACGCGGTC
GAACGGGACG AGTATGGTAA TATTTCGCGC GTCTTTTTGA GCGCGCGCAC AGGGCAGGGG
CTGGACACAC TGCGCGCTGC CATCGCTGAA ATCGCTACTG CCGAACCTCT TCCCGAAACG
CTGGTCGATC TCTCGGAAGA AGACCGGTCG GCGGCACCAC GCGACGACCG CAAGGTCCCA
GAACTCGGGC ATTGA
|
|---|
| Protein sequence | MAITPGRLIL ISSNLINAAL VGIDFGKIDF EASLEELSLL AQSAGANPLV TLTGRRSSPD
AKMFVGSGKA EELRLACEAN DIELVIFNHA LAPAQQRNLE QALNRRVIDR TSLILDIFAQ
RARSHEGKLQ VELAQLQYLS TRLIRAWTHL ERQKGGIGLR GPGETQLETD RRLIGERIKA
LKTRLEKLRR QHGTQRRARS RNQTMSVSLV GYTNAGKSTL FNALTKAQAY AADQLFATLD
TTSRRVYLGD EAGQVVVSDT VGFIRELPHQ LVAAFRATLE ETIHADLLLH VVDASSAVRL
DQIDQVNEVL HAIGADTIRQ VLVFNKIDAV PELAARGDAV ERDEYGNISR VFLSARTGQG
LDTLRAAIAE IATAEPLPET LVDLSEEDRS AAPRDDRKVP ELGH
|
|---|
| |