Gene Bxe_A1599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A1599 
Symbolhfq 
ID4003515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp3146335 
End bp3146571 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content53% 
IMG OID637948033 
ProductRNA-binding protein Hfq 
Protein accessionYP_559408 
Protein GI91784202 
COG category[R] General function prediction only 
COG ID[COG1923] Uncharacterized host factor I protein 
TIGRFAM ID[TIGR02383] RNA chaperone Hfq 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.00956933 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.102127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA AAGGGCAATT GTTACAAGAC CCGTTTTTGA ACGCACTGCG TAAAGAGCAT 
GTGCCGGTGT CGATCTACCT GGTCAACGGC ATCAAGCTTC AAGGGAACAT CGAATCGTTC
GACCAGTACG TCGTGTTGCT CCGGAATACG GTCACCCAGA TGGTCTACAA GCACGCAATC
TCGACTGTCG TGCCAGCCCG CCCGGTGAAT TTCCACCCGG ATTCCGAACA GTCCTAA
 
Protein sequence
MSNKGQLLQD PFLNALRKEH VPVSIYLVNG IKLQGNIESF DQYVVLLRNT VTQMVYKHAI 
STVVPARPVN FHPDSEQS