Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1599 |
Symbol | hfq |
ID | 4003515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 3146335 |
End bp | 3146571 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637948033 |
Product | RNA-binding protein Hfq |
Protein accession | YP_559408 |
Protein GI | 91784202 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.00956933 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.102127 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACA AAGGGCAATT GTTACAAGAC CCGTTTTTGA ACGCACTGCG TAAAGAGCAT GTGCCGGTGT CGATCTACCT GGTCAACGGC ATCAAGCTTC AAGGGAACAT CGAATCGTTC GACCAGTACG TCGTGTTGCT CCGGAATACG GTCACCCAGA TGGTCTACAA GCACGCAATC TCGACTGTCG TGCCAGCCCG CCCGGTGAAT TTCCACCCGG ATTCCGAACA GTCCTAA
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Protein sequence | MSNKGQLLQD PFLNALRKEH VPVSIYLVNG IKLQGNIESF DQYVVLLRNT VTQMVYKHAI STVVPARPVN FHPDSEQS
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