Gene Bxe_A1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A1561 
SymbollysS 
ID4005437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp3187844 
End bp3189385 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content63% 
IMG OID637948071 
Productlysyl-tRNA synthetase 
Protein accessionYP_559446 
Protein GI91784240 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1190] Lysyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.274992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC CGACCCAACC GAACGCGGCC CAGCCTAATG TCGTACCCGA GGTGGACGAC 
AACAAGATCA TCGCCGAGCG CCGCGAAAAG CTGCGCGAGC TGCGTGAGCA AGGCGTCGCC
TATCCGAACG ATTTCCGCCC CACGCATCAC GCCGAAGATT TGCAAGCGCA ATACGAGCAC
TCCGACAAGG AAGCGCTCGA AGCGAATCCG CTCGAAGTCG CGATCGCCGG CCGCATGATG
CTCAAGCGCG TGATGGGCAA GGCGAGCTTT GCGACCGTGC GCGACGGCTC GGGTCAGATC
CAGTTCTTCA TCACGCCCGC CGACGTCGGC CAGGAAACGT ACGACGCCTT CAAGAAGTGG
GACATGGGCG ACATCGTCGC GGCGCGCGGC GTACTGTTCC GCACCAACAA GGGCGAGCTC
TCGGTGCGCT GCACCGAACT GCGTCTGCTG TCGAAGTCGC TGCGGCCGCT GCCGGACAAG
TTCCACGGGC TGTCCGACCA GGAAATGAAG TATCGCCAGC GCTATGTCGA TCTGATCGTC
ACGCCGGAAA CGCGCAAGAC TTTCGTTGCG CGCACGAAGG CGATTTCGTC GATCCGCAAG
TTCATGGCCG ACGCCGACTT CATGGAAGTC GAAACGCCCA TGCTGCACCC GATTCCGGGC
GGTGCGGCGG CCAAGCCGTT CACCACGCAC CACAACGCGC TCGACATGCA GATGTTCCTG
CGCATCGCGC CGGAGCTGTA TCTGAAGCGT CTGGTGGTCG GCGGCTTCGA GCGTGTGTTC
GAGATCAACC GTAACTTCCG CAATGAGGGC GTGTCCGTGC GCCACAATCC GGAATTCACG
ATGATCGAGT TCTACGCGGC GTACACCGAC TACAAGTGGC TGATGGACTT CACCGAGCAG
TTGATCCGCC AGGCCGCCAT CGACGCGCTG GGCACGGCCA CCATCACGTA TCAGGGCCGC
GAACTGGATC TGGCCAAGCC GTTCCATCGC CTCACGATCA CCCAGGCGAT CCAGAAGTAC
GCGCCGCAGT ACACGAACGA GCAACTCGCC GACAGCGCTT TCCTGCGCAC CGAACTGAAG
AAGTTCGGCG TGGACGCATC GCAGCCGCAG TTCCTGAACG CGGGCGTCGG TGCGCTGCAA
CTCGCGCTGT TCGAGGAGAC CGCCGAGTCG CAATTGTGGG AGCCGACCTA CATCATCGAC
TACCCGATCG AGGTTTCGCC GCTCGCGCGC GCGTCGGACA AGGTCGAGGG CATCACGGAG
CGTTTCGAGC TGTTCATCAC CGGCCGTGAA ATCGCCAACG GCTTCTCGGA GCTGAACGAT
CCGGAAGACC AGGCGGCCCG CTTCAGGAAG CAGGTCGACC AGAAAGACGC CGGCGACGAA
GAAGCCATGT TCTACGACGC GGACTACATT CGCGCGCTCG AATACGGCAT GCCGCCGGCC
GGCGGTTGCG GCATCGGTAT CGACCGTCTG GTCATGTTGC TGACCGATAG CCCGAGCATT
CGCGACGTGA TTCTGTTCCC GCATCTGCGC CGCGAAGACT GA
 
Protein sequence
MTEPTQPNAA QPNVVPEVDD NKIIAERREK LRELREQGVA YPNDFRPTHH AEDLQAQYEH 
SDKEALEANP LEVAIAGRMM LKRVMGKASF ATVRDGSGQI QFFITPADVG QETYDAFKKW
DMGDIVAARG VLFRTNKGEL SVRCTELRLL SKSLRPLPDK FHGLSDQEMK YRQRYVDLIV
TPETRKTFVA RTKAISSIRK FMADADFMEV ETPMLHPIPG GAAAKPFTTH HNALDMQMFL
RIAPELYLKR LVVGGFERVF EINRNFRNEG VSVRHNPEFT MIEFYAAYTD YKWLMDFTEQ
LIRQAAIDAL GTATITYQGR ELDLAKPFHR LTITQAIQKY APQYTNEQLA DSAFLRTELK
KFGVDASQPQ FLNAGVGALQ LALFEETAES QLWEPTYIID YPIEVSPLAR ASDKVEGITE
RFELFITGRE IANGFSELND PEDQAARFRK QVDQKDAGDE EAMFYDADYI RALEYGMPPA
GGCGIGIDRL VMLLTDSPSI RDVILFPHLR RED