Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1561 |
Symbol | lysS |
ID | 4005437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 3187844 |
End bp | 3189385 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637948071 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_559446 |
Protein GI | 91784240 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.274992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC CGACCCAACC GAACGCGGCC CAGCCTAATG TCGTACCCGA GGTGGACGAC AACAAGATCA TCGCCGAGCG CCGCGAAAAG CTGCGCGAGC TGCGTGAGCA AGGCGTCGCC TATCCGAACG ATTTCCGCCC CACGCATCAC GCCGAAGATT TGCAAGCGCA ATACGAGCAC TCCGACAAGG AAGCGCTCGA AGCGAATCCG CTCGAAGTCG CGATCGCCGG CCGCATGATG CTCAAGCGCG TGATGGGCAA GGCGAGCTTT GCGACCGTGC GCGACGGCTC GGGTCAGATC CAGTTCTTCA TCACGCCCGC CGACGTCGGC CAGGAAACGT ACGACGCCTT CAAGAAGTGG GACATGGGCG ACATCGTCGC GGCGCGCGGC GTACTGTTCC GCACCAACAA GGGCGAGCTC TCGGTGCGCT GCACCGAACT GCGTCTGCTG TCGAAGTCGC TGCGGCCGCT GCCGGACAAG TTCCACGGGC TGTCCGACCA GGAAATGAAG TATCGCCAGC GCTATGTCGA TCTGATCGTC ACGCCGGAAA CGCGCAAGAC TTTCGTTGCG CGCACGAAGG CGATTTCGTC GATCCGCAAG TTCATGGCCG ACGCCGACTT CATGGAAGTC GAAACGCCCA TGCTGCACCC GATTCCGGGC GGTGCGGCGG CCAAGCCGTT CACCACGCAC CACAACGCGC TCGACATGCA GATGTTCCTG CGCATCGCGC CGGAGCTGTA TCTGAAGCGT CTGGTGGTCG GCGGCTTCGA GCGTGTGTTC GAGATCAACC GTAACTTCCG CAATGAGGGC GTGTCCGTGC GCCACAATCC GGAATTCACG ATGATCGAGT TCTACGCGGC GTACACCGAC TACAAGTGGC TGATGGACTT CACCGAGCAG TTGATCCGCC AGGCCGCCAT CGACGCGCTG GGCACGGCCA CCATCACGTA TCAGGGCCGC GAACTGGATC TGGCCAAGCC GTTCCATCGC CTCACGATCA CCCAGGCGAT CCAGAAGTAC GCGCCGCAGT ACACGAACGA GCAACTCGCC GACAGCGCTT TCCTGCGCAC CGAACTGAAG AAGTTCGGCG TGGACGCATC GCAGCCGCAG TTCCTGAACG CGGGCGTCGG TGCGCTGCAA CTCGCGCTGT TCGAGGAGAC CGCCGAGTCG CAATTGTGGG AGCCGACCTA CATCATCGAC TACCCGATCG AGGTTTCGCC GCTCGCGCGC GCGTCGGACA AGGTCGAGGG CATCACGGAG CGTTTCGAGC TGTTCATCAC CGGCCGTGAA ATCGCCAACG GCTTCTCGGA GCTGAACGAT CCGGAAGACC AGGCGGCCCG CTTCAGGAAG CAGGTCGACC AGAAAGACGC CGGCGACGAA GAAGCCATGT TCTACGACGC GGACTACATT CGCGCGCTCG AATACGGCAT GCCGCCGGCC GGCGGTTGCG GCATCGGTAT CGACCGTCTG GTCATGTTGC TGACCGATAG CCCGAGCATT CGCGACGTGA TTCTGTTCCC GCATCTGCGC CGCGAAGACT GA
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Protein sequence | MTEPTQPNAA QPNVVPEVDD NKIIAERREK LRELREQGVA YPNDFRPTHH AEDLQAQYEH SDKEALEANP LEVAIAGRMM LKRVMGKASF ATVRDGSGQI QFFITPADVG QETYDAFKKW DMGDIVAARG VLFRTNKGEL SVRCTELRLL SKSLRPLPDK FHGLSDQEMK YRQRYVDLIV TPETRKTFVA RTKAISSIRK FMADADFMEV ETPMLHPIPG GAAAKPFTTH HNALDMQMFL RIAPELYLKR LVVGGFERVF EINRNFRNEG VSVRHNPEFT MIEFYAAYTD YKWLMDFTEQ LIRQAAIDAL GTATITYQGR ELDLAKPFHR LTITQAIQKY APQYTNEQLA DSAFLRTELK KFGVDASQPQ FLNAGVGALQ LALFEETAES QLWEPTYIID YPIEVSPLAR ASDKVEGITE RFELFITGRE IANGFSELND PEDQAARFRK QVDQKDAGDE EAMFYDADYI RALEYGMPPA GGCGIGIDRL VMLLTDSPSI RDVILFPHLR RED
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