Gene Bxe_A1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A1560 
Symbol 
ID4005438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp3189672 
End bp3190397 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content68% 
IMG OID637948072 
Producthypothetical protein 
Protein accessionYP_559447 
Protein GI91784241 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.24397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.252687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATC CGAACACACA ACCCACCACG CAATCTTCGC AGCCTGCGCA ACAACGCCGG 
CTTCACCCGC TCATCGCAAC CGCCGCCGGC GCAGTGATCA TCGCGAGCCT CGTCGCCACG
GCGGCCGTGA CGGGCCTGTT CCCGAAGGCA TCCAGCAACG GCGCGCAAAA CGATCAGACA
CAAGCGGCGC AGGTGACCAC ACAAGGCACG CAGCCGGGCG TGGTCGATTC AGCGGCACCC
GCCAATCCGA GCGCGCAGCA GGCTGCACAA CAGCCGCAAC CCGCTCCGGC GCCCGCACCC
GCGCAGCAGC AATACGCGCA GCGACAACAG GCACAGCCAG CCCCGCAACC CGCGCCTGAC
TACGCCCAGC AACAGCCCGC ACGACCGGCC TACTGCTCGA CGTGCGGCAC GGTCGAAGCC
ATCTCGGCGG TCCGTCAGGA AGGTCATGGC ACCGGTATCG GCGCAGTCGG CGGCGCGGTA
GCCGGCGGCG TGGTCGGCAA CCAGTTCGGC AGCGGCGGCG GCCGCACCGC GATGACCATT
CTCGGCGCGC TCGGCGGCGG CCTTGCCGGC AACTCGGTCG AAAAACATAT TCGCAGCACG
ACGTCGTACT CAGTGCGCGT GCGGATGGAG AACGGCAAGA TGCGTTACTT CACTTACCAT
GAAGCGCCGC CGTTCCAGCA GGGCCAGCGC GTGCGTGTGG AGAACGGCAC GCTCGTGGCA
AGCTGA
 
Protein sequence
MDNPNTQPTT QSSQPAQQRR LHPLIATAAG AVIIASLVAT AAVTGLFPKA SSNGAQNDQT 
QAAQVTTQGT QPGVVDSAAP ANPSAQQAAQ QPQPAPAPAP AQQQYAQRQQ AQPAPQPAPD
YAQQQPARPA YCSTCGTVEA ISAVRQEGHG TGIGAVGGAV AGGVVGNQFG SGGGRTAMTI
LGALGGGLAG NSVEKHIRST TSYSVRVRME NGKMRYFTYH EAPPFQQGQR VRVENGTLVA
S