Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1560 |
Symbol | |
ID | 4005438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 3189672 |
End bp | 3190397 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637948072 |
Product | hypothetical protein |
Protein accession | YP_559447 |
Protein GI | 91784241 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3133] Outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.24397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.252687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAATC CGAACACACA ACCCACCACG CAATCTTCGC AGCCTGCGCA ACAACGCCGG CTTCACCCGC TCATCGCAAC CGCCGCCGGC GCAGTGATCA TCGCGAGCCT CGTCGCCACG GCGGCCGTGA CGGGCCTGTT CCCGAAGGCA TCCAGCAACG GCGCGCAAAA CGATCAGACA CAAGCGGCGC AGGTGACCAC ACAAGGCACG CAGCCGGGCG TGGTCGATTC AGCGGCACCC GCCAATCCGA GCGCGCAGCA GGCTGCACAA CAGCCGCAAC CCGCTCCGGC GCCCGCACCC GCGCAGCAGC AATACGCGCA GCGACAACAG GCACAGCCAG CCCCGCAACC CGCGCCTGAC TACGCCCAGC AACAGCCCGC ACGACCGGCC TACTGCTCGA CGTGCGGCAC GGTCGAAGCC ATCTCGGCGG TCCGTCAGGA AGGTCATGGC ACCGGTATCG GCGCAGTCGG CGGCGCGGTA GCCGGCGGCG TGGTCGGCAA CCAGTTCGGC AGCGGCGGCG GCCGCACCGC GATGACCATT CTCGGCGCGC TCGGCGGCGG CCTTGCCGGC AACTCGGTCG AAAAACATAT TCGCAGCACG ACGTCGTACT CAGTGCGCGT GCGGATGGAG AACGGCAAGA TGCGTTACTT CACTTACCAT GAAGCGCCGC CGTTCCAGCA GGGCCAGCGC GTGCGTGTGG AGAACGGCAC GCTCGTGGCA AGCTGA
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Protein sequence | MDNPNTQPTT QSSQPAQQRR LHPLIATAAG AVIIASLVAT AAVTGLFPKA SSNGAQNDQT QAAQVTTQGT QPGVVDSAAP ANPSAQQAAQ QPQPAPAPAP AQQQYAQRQQ AQPAPQPAPD YAQQQPARPA YCSTCGTVEA ISAVRQEGHG TGIGAVGGAV AGGVVGNQFG SGGGRTAMTI LGALGGGLAG NSVEKHIRST TSYSVRVRME NGKMRYFTYH EAPPFQQGQR VRVENGTLVA S
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