| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1552 |
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| Symbol | |
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| ID | 4005446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 3196212 |
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| End bp | 3196742 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637948080 |
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| Product | BadM/Rrf2 family transcriptional regulator |
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| Protein accession | YP_559455 |
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| Protein GI | 91784249 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00106628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0365649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGACTCA CCACGAAAGG CCGTTTCGCC GTCACGGCGA TGATTGACCT GGCACTGCGC
CAGGAGCAGG GCCCGGTGAC GCTTGCGGGT ATCAGCCAGC GCCAGCACAT TTCCCTGTCG
TACCTCGAGC AGCTGTTTGG CAAGCTGCGT CGTCATGAGA TCGTCGAGTC CGTACGCGGG
CCGGGCGGCG GCTACAATCT GGCCCGCCGC GCTGAAGACG TGACCGTGGC CGACATCATC
ATCGCGGTCG ACGAGCCGCT CGACGCCACC CAGTGCGGCG GCAAGGGCTC TTGCGAGGGG
ACCAAACAGC ACGACGGCCA CTGCATGACG CACGAGCTGT GGTCCACGCT GAACCAGAAA
ATGGTCGAAT ACCTCGATTC GGTCTCCCTG AAGGATCTGG TCGACCAGCA GCGCTCGCGC
GAAGGGTCGC CGGCGGTGTT GCGCGACAGG CGCAACGAGG CGCCGGTGGT CGAACCCGTC
CGCGTGGCGC CCAAAGGGCC CAATTCCGTT TTCAACATGG CCGGTTCCTA G
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| Protein sequence | MRLTTKGRFA VTAMIDLALR QEQGPVTLAG ISQRQHISLS YLEQLFGKLR RHEIVESVRG
PGGGYNLARR AEDVTVADII IAVDEPLDAT QCGGKGSCEG TKQHDGHCMT HELWSTLNQK
MVEYLDSVSL KDLVDQQRSR EGSPAVLRDR RNEAPVVEPV RVAPKGPNSV FNMAGS
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