| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1494 |
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| Symbol | |
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| ID | 4004098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 3265034 |
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| End bp | 3267343 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637948138 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_559512 |
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| Protein GI | 91784306 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.314319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.616711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTGCG AAGCGACATC AGAAAACACG ATCGGAGCCG CTCCTGATGG CACCCGTTAC
GGCGCGAATC TCGCCGAAGG GGTGCTCGCG TCGGAGCGCA CGGTGTTGCG TTTGATCACA
CGCAACACGC CGCTGCCGGA ATTGCTGGAC GAAGTATGCC GCCGCGCGGA AGCGCTGCTG
GGCGAAGGCG CGTCCTGTTC CATCCTGTTG CTCGACGCCG AAGGCGTGCG CGCCAGGGTG
GGCGGCGCGC CGTCGCTGCC CGAACACTTC AGCGCGGCGA TCGACGGGGT GGCGATCGGT
CCGCGGGCCG GCTCGTGCGG CACCGCCATG TTCGAGCGGC GGCTCGTCGT CGTCGAGGAT
ATCGAAACCG ATCCGCTGTG GGCCGACTTC CGGCACCTCG CGCTGCCGCT CGGCCTCAGG
GCCTGCTGGT CGGTACCTTT TGAAAACGAT GCCGGTGTGG TGCTCGGCGC CTTCGCGGTG
TATTACCGCA AGTCGCGCCG TCCCAGCGCC GAAGAAGAAG CCATGCTGCG CGATATCAGC
CGCAGCGTCG GTCTGGCCGT GCATCAGGAC ACAATGGCGC AGCGGCTCGC GCACAGCGAG
GAACATCACC GGCTGGTAGT CGATCATCTG ATCGAAGGGA TCGTCGTGCA GTCGCGGGCG
GGTATCGTGC TGGCCTGCAA TCCGAGCGCG CAGCGCATTC TGCGGGCCAC GCCGCAGATC
GTCGGCCGCA GTATCCAGAC GGTGATGGTG CGCGCCTATC ACGAGGACGG CTCGGTCGTC
ACCGAGGCGG TCCGCCCGAC CAACCAGGTG CTGGCAACCG GCAAACCCAT GCTCGGCGTC
ACGATCGGCC TGGAGCTGAT TGGCGGCGAC ATCGTCTGGA TCACAGAGAA CGTGGTGCCG
ATCATCAAGG CGGGCGAGAG CGAGCCGAGT TCAGTGCTGA TCTCGTTCAC CGACATCGGC
CCCGTGCGCG AAGCGCAACG GCAGCTCAAG TTCCTCGCCA CCCGCGATTC GCTCACGGGC
CTTTACAACC GCGCGTATCT CACGGAGCGG CTGCGCGATC TGTTTTCGCT CGATACCTCG
TCCGGTATGG GCGAACTGGT GAGCGTCGCG GTGCTGTTCG TCGACCTGGA CGGCTTCAAG
AAGGTCAACG ACACCGCCGG TCACGAGGCC GGCGACGCCC TGCTCTGCAG CGTGGCGGAG
CGGCTCGCGG CGTGCATTTC GCCCGAAGAC ACGCTGGCGC GCGTAGGCGG CGACGAGTTC
GTGATCGTGG TCAGCGCGTA TGAAAACACC GGGCATCTGA TCGGCCTCGC GCAGCGCATT
CTCGACATGA TCGCCGTGCC GTTCGCGGTG GCGGACAACG AGTACTACCT GGGCGCGTCG
ATCGGCATCA GCCGTTTTCC CGAAGACGGC CAGGACGTGG CCACGCTGCT GCGCAACGCC
GATTCGGCGA TGTACTACGC CAAGCAGCGC GGCCGCAACA ACTTCCAGTT CTTCACCGCC
GAGCTGAACC GGCAGCTGCA ACGCCGCTTC ACGATCGAGC AGTCGCTGCG GCGCGCGCTC
GCCGGCAACG AACTGAGCCT CGTGTATCAG CCGATCGTCG ACAGTCAGGA CGGCCGCACG
ATCGGCGCGG AGGCGCTGCT GCGCTGGTAC AACAGCGAGC TGGGCAACGT GTCGCCGGGG
GAATTCATTC CCGTGGCCGA AGATGCGGGG CTGATTGTCG AGATCGGCAA CTTCGTGCTG
ACGCGGGCCT GCGAACAGGT GGCGCAGTGG CGGCGCACGC TGGCGCCGGA GCTGATCGTC
GCGGTGAATC TGTCGCCCCG GCAGTTCAAC GACGGCCTCG TGGAGCGCAT CCAACGCTGC
CTCCTGCAAA CCGGGCTCGA ACCGGCGGCG CTGGAACTGG AGATCACCGA GCGGCTGCTG
ATGAGCGACA GCGAAACGGT GCTGCCCATG CTGAGCGCGC TGAATGCGAT GGGCGTACGT
ATTTCCGTCG ACGATTTCGG CACCGGTTAC TCGTCGTTGT CGTATCTGAA GCGCTTTCCG
CTGCATAACC TGAAGATCGA TCGCTCGTTC GTCGCCGGCT TGCCGGATCA TCGCGATTCC
ATTGCGATCA CCCAGGCGGT GGTGGCGATG GCGCACTCGC TCGGCATGAA CGTCACCGCC
GAAGGGGTGG AAACCGCCGA ACAGGCGGCT TTCCTGCGCG CGATCGACTG CGACAAGCAG
CAGGGCTATT TCTACAGCCG CCCGGTCGGC GCCAGTGCGT ATGCCCGCAG TTTGTGGGAC
GCGCAGGTCG GTCTCGCCGA CGCCTCCTGA
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| Protein sequence | MTCEATSENT IGAAPDGTRY GANLAEGVLA SERTVLRLIT RNTPLPELLD EVCRRAEALL
GEGASCSILL LDAEGVRARV GGAPSLPEHF SAAIDGVAIG PRAGSCGTAM FERRLVVVED
IETDPLWADF RHLALPLGLR ACWSVPFEND AGVVLGAFAV YYRKSRRPSA EEEAMLRDIS
RSVGLAVHQD TMAQRLAHSE EHHRLVVDHL IEGIVVQSRA GIVLACNPSA QRILRATPQI
VGRSIQTVMV RAYHEDGSVV TEAVRPTNQV LATGKPMLGV TIGLELIGGD IVWITENVVP
IIKAGESEPS SVLISFTDIG PVREAQRQLK FLATRDSLTG LYNRAYLTER LRDLFSLDTS
SGMGELVSVA VLFVDLDGFK KVNDTAGHEA GDALLCSVAE RLAACISPED TLARVGGDEF
VIVVSAYENT GHLIGLAQRI LDMIAVPFAV ADNEYYLGAS IGISRFPEDG QDVATLLRNA
DSAMYYAKQR GRNNFQFFTA ELNRQLQRRF TIEQSLRRAL AGNELSLVYQ PIVDSQDGRT
IGAEALLRWY NSELGNVSPG EFIPVAEDAG LIVEIGNFVL TRACEQVAQW RRTLAPELIV
AVNLSPRQFN DGLVERIQRC LLQTGLEPAA LELEITERLL MSDSETVLPM LSALNAMGVR
ISVDDFGTGY SSLSYLKRFP LHNLKIDRSF VAGLPDHRDS IAITQAVVAM AHSLGMNVTA
EGVETAEQAA FLRAIDCDKQ QGYFYSRPVG ASAYARSLWD AQVGLADAS
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