| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1477 |
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| Symbol | |
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| ID | 4003098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 3284537 |
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| End bp | 3285823 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637948155 |
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| Product | TRAP C4-dicarboxylate transporter, DctM (12TM)subunit |
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| Protein accession | YP_559529 |
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| Protein GI | 91784323 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0573359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.377475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCT TCCTGTTCGT GCTTTTCATC GGCCTGATGG CCCTCGGCGT GCCGGTGACG
ATGGCGATCG GCGCGTCGGC GCTCTCCGTA TTCGCGATGA GCGGCTTCAC CGATGCGCTT
TATGTGTTGC CGCAACAGAT GCTCGAAGGC ATCGACAGCC CGTCGATGAT GTCGATTCCG
TTTTTCATTC TCGCGGGCAA CCTGATGAAC GCGGTGGGCG TGACCGACCG GATCTTCTCG
CTGGCTCTCG TGCTCGTGGG GCGTTTTCGG GGCGGCCTTG CGCAGGTCAG CGTGATTGCG
GCCGCCATCT TCTCCGGCAT TTCGGGCTCG GCGCTCGCCG ACATCGCGGG ACTCGGGGCG
ATCGAAGTGA AAGCCATGCG CGAGCGCGGC TACCCTGCTG AATTCGCCGC TGCCGTATCC
GTCGCGTCGT CGGTCATGGC GCCGATCATG CCGCCGTCGA TTGCGTTCAT TGTGTACGCG
TCAATGGCCA ATGCGTCGGT GGCCCGCATG TTCATGGCGG GCATCGTGCC CGCCACGTTG
CTGGCGATTT CACTGATGGT GTGCAATCGC ATCATTGCCG GCAGGCGGGG TTATCCGCGA
GAGGAAGCCA TGCCGTTCGA CCTCGCGGTG CGTACCGTCA TCGCCGGCCT GCCCGCGCTC
GGCGCACCGG CGATCATTCT GATCGGCACG ATGGGCGGCT ATACGACGGT TGGCGAAGCG
GGCATTCTCG CTTCGGTCTA TTCGATGCTG CTCGGTTTCG CGTACCGCTC CATCAACCTG
AAGAAAGTCT GGCAAGCGAT CAACGACACG GTTTCTGTCA CGGCCCTGAT CATGGTGATC
ATCGGGTTCT CGCATTTCAT GAGCTGGGTG CTGGCCATCC AGCAGGCGCC GCAGCATCTG
GCAGCGCTCG TGCTGACGCT CACGCAATCG CCGACGGTCC TGATGCTGCT GCTCGTCGCA
TTCCTGCTCT TCATCGGCTG CTTTATCGAA AGCGCGCCGG CCAAGCTGAT TCTCGTGCCG
GTGCTGCTGC CGGTAATCGA CCAGTTCGGC ATCGACCGCG TGCAGTTCGG CGTGGTGATG
ACGCTCGCTC TCGCACTCGG CATCGCGCAT CCGCCAATGG GTGTAGGCCT CTTTGTCGTG
ACGCGCGTGT CCAATGTGTC GCTGGAACGC GTCACGATGG CAGTGCTGCC TCTGCTGATT
CCGCTGCTCG TCGTCCTGAT CGTCGTGGCG CTGATTCCTT CGCTATCGAC GTGGCTGCCT
GATCTGGTGA TGGGCGCGCC TTCCTGA
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| Protein sequence | MPAFLFVLFI GLMALGVPVT MAIGASALSV FAMSGFTDAL YVLPQQMLEG IDSPSMMSIP
FFILAGNLMN AVGVTDRIFS LALVLVGRFR GGLAQVSVIA AAIFSGISGS ALADIAGLGA
IEVKAMRERG YPAEFAAAVS VASSVMAPIM PPSIAFIVYA SMANASVARM FMAGIVPATL
LAISLMVCNR IIAGRRGYPR EEAMPFDLAV RTVIAGLPAL GAPAIILIGT MGGYTTVGEA
GILASVYSML LGFAYRSINL KKVWQAINDT VSVTALIMVI IGFSHFMSWV LAIQQAPQHL
AALVLTLTQS PTVLMLLLVA FLLFIGCFIE SAPAKLILVP VLLPVIDQFG IDRVQFGVVM
TLALALGIAH PPMGVGLFVV TRVSNVSLER VTMAVLPLLI PLLVVLIVVA LIPSLSTWLP
DLVMGAPS
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