| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1475 |
|---|
| Symbol | |
|---|
| ID | 4003100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 3286375 |
|---|
| End bp | 3287409 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637948157 |
|---|
| Product | TRAP dicarboxylate transporter, periplasmic ligand binding subunit DctP |
|---|
| Protein accession | YP_559531 |
|---|
| Protein GI | 91784325 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.137006 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.379155 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGA AAACCTGTCG TACCGGCGTT GCAGCGATCG CTTTCGTGCT GTCCTCCCTT
GCCGCGTTGC CGGCGTCCGC GCAGGACACG TGGCGCATGG CTACCGATCA GCAGGCCGAT
AGCCCCGAAG GCAAGGCGTA TCAGCGTTTC GCCGATCTCG TGGCGAAGTA CTCGAACGAT
CAGCTGAAGA TAACGATCTT TCCGGCCTCG CAACTCGGCA GCGCGAGTGC CATGCTCGAA
CAGATCAGCG GCGGATTGAT CCAGGTGTTT CCGGACGCGC TTGCGGATGC GTCGAAATGG
GTACCCGACG TGCAGTACGT CAGCTCGCCG TTTCTGTTCC AGAGCCGCGC ACAGTGGGTC
AACTTCATGC ACTCCGACGT CGTGAAGGGA TGGGTGGGCC AGATTCATGA CAAGGCAGGC
GTGGATATTC TCGGCGATCC GTCGCAATTC ATGCGCGGCC CGTATCGCGT GCTCGTGTCG
ACGAAGCCGG TGCACAGCCT CGCCGACATC GGCGGTCTGA AGCTGCGCCT TGCGAAGGAC
AAGCTGAGCG TCGACGTGTG GACGAGACTC GGCGCGAGTG TGCAGGTGCT GGACTGGTCC
GCAGTGTACG ACGGCCTCGA CCGTCACATG ATCGACGCGA TGACGAGTCC GATTTCCCAG
CTCGAAAGCA TCAAGGTGAC CGAGGTGGCC AAGTATGTTG CACGCACCGA CGAGTACTGG
CAGAGCGTTG CGTTCTTCGT CAACCACAAG GCGTATGCGG CGCTCTCGCC GGCCGAGAAG
AGCGCTGTGG ACCGCGCCTA TGCCGAGAGC AGCGCGTACG CGGCGGAACT GGAAAAGAGC
TTCACCGAAA CGGCCATCGA CAAGATGAAG AAGAGCGGCG TGCAGTTCAC CGTGCTCGAC
ACGAAGCCGA TCGTGCAGCA GGCGCGCACG CTGTACGACG CGCGCTCGAC AGCCGGCACC
TTGCCGAAGG GCTTTCTCGC TGCGGTGCAG TCGGTGCAGT CGAACGTGAC GACGGCATCG
GCGTCAGGTC AGTAG
|
|---|
| Protein sequence | MLKKTCRTGV AAIAFVLSSL AALPASAQDT WRMATDQQAD SPEGKAYQRF ADLVAKYSND
QLKITIFPAS QLGSASAMLE QISGGLIQVF PDALADASKW VPDVQYVSSP FLFQSRAQWV
NFMHSDVVKG WVGQIHDKAG VDILGDPSQF MRGPYRVLVS TKPVHSLADI GGLKLRLAKD
KLSVDVWTRL GASVQVLDWS AVYDGLDRHM IDAMTSPISQ LESIKVTEVA KYVARTDEYW
QSVAFFVNHK AYAALSPAEK SAVDRAYAES SAYAAELEKS FTETAIDKMK KSGVQFTVLD
TKPIVQQART LYDARSTAGT LPKGFLAAVQ SVQSNVTTAS ASGQ
|
|---|
| |