Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1438 |
Symbol | |
ID | 4003696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 3327993 |
End bp | 3328607 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637948195 |
Product | cadmium resistance transporter CadD |
Protein accession | YP_559568 |
Protein GI | 91784362 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4300] Predicted permease, cadmium resistance protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.799585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.500244 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGCC TTGCCCTGCT TGCCATCGCG GGTTACACCG CCACCAACAT CGACAACCTG TTCGTGCTGC TCGCCTTCCT CGCGGAAGCG GGCGGCGAGC GGCGTCGCGT GATCGCCGGC CAGTGTGCGG GTTCGCTGAC CTTGATCGTG GGGTCGATGT TGCTCGCCGC ATTGCTCAAG CATCTGCCGG CGGGCTATGT CGGATTGCTC GGCATCCTGC CGATCGGCGT CGGACTCGCC AAGGCATGGG AGCGCTTTGG CCCGCGCAAC GCGCAACAGG AGGAAGCGCG GCGGACCGCC GGCGAGCCGT CCGCGGCGCG CGCCTCATCC TGGTGGGTGG TGGCCTGCGT CGCCATCGCC AACGGTTCCG ACAATCTCGC TGTTTATGTG CCGCTGTACG CGAGCCATTC ACACAGCGAG GGCGCATTCA TCTCGCTCGT CTTTTTCGTG ATGATCGGAC TCTGGTGCGC GGGCGCCGCG TGGCTCGTCA AACATCCACG GCTCGGCGCG CCGATCCGGC GCTACGGCAC CGCGCTGCTA CCGCTGATCC TGGTGGTGAT CGGCGTCTCG GTGATCGTGC AGAACGATAC GCCGCGAATC GTATTCGGGC TCTGA
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Protein sequence | MFSLALLAIA GYTATNIDNL FVLLAFLAEA GGERRRVIAG QCAGSLTLIV GSMLLAALLK HLPAGYVGLL GILPIGVGLA KAWERFGPRN AQQEEARRTA GEPSAARASS WWVVACVAIA NGSDNLAVYV PLYASHSHSE GAFISLVFFV MIGLWCAGAA WLVKHPRLGA PIRRYGTALL PLILVVIGVS VIVQNDTPRI VFGL
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