| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1430 |
|---|
| Symbol | |
|---|
| ID | 4003704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 3336476 |
|---|
| End bp | 3337987 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637948203 |
|---|
| Product | NCS1 family nucleobase/cation symporter |
|---|
| Protein accession | YP_559576 |
|---|
| Protein GI | 91784370 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
|---|
| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAGA CAGCGCAACC CGCCGAGCCG CAGTTCGCAA CCGGCGTGCA GGGCAGCAGT
CTTTACAACG ACGACCTGGC GCCGACCGGT ATCGCGCAGC GCACATGGAA GTGGTATCAC
TTCGCGGCGC TCTGGGTAGG GATGGTGATG AACATCGCGT CCTACATGCT CGCCGCTGGT
TTGACGGAAG AGGGCATGTC GCCGTGGCAA GCGGTGATGA CCGTGCTGCT CGGCAACCTG
ATCGTGCTGG TGCCGATGCT GCTGATCGGC CATGCGGGCG CGAAGCACGG CATTCCGTAC
GCGGTGCTGG TGCGCTCCTC GTTCGGCACG CAGGGCGCCA AACTGCCGGC GATGCTGCGC
GCGATCGTCG CCTGTGGCTG GTACGGGATT CAGACGTGGC TCGGCGGCAG CGCGATCTAT
ACGCTGCTGA ACATTCTCAC CGGCAACGCG CTGCACGGCG CGGCTTTGCC GTTCCTCGAC
ATCTCGCTTG CGCAACTGGC CTGTTTCCTC GTGTTCTGGG CGCTGCAGAT CTACTTCATC
GTGCATGGCA CCGATTCGAT CCGCTGGCTC GAAAGCTGGT CCGCGCCGAT CAAGATCGTG
ATGTGCATTG CGCTCGTATG GTGGGCGACA TCCAAAGCGG GCGGTCTGGG CTCGATGCTG
TCGGCGCCGT CGCAATTCGT GCCGGGCGGC AAGAAAGAGG GCATGTTCTG GATTACCTTC
TGGCCCGGCC TTACCGCAAT GGTCGGATTC TGGGCCACCC TCGCATTGAA TATTCCCGAC
TTCACGCGTT TTGCCAGAAC CCAGCGTGAT CAGATCATCG GCCAGTCAGT CGGCTTGCCG
GTGCCGATGG CGTTGCTCTC GGTGATCTCG GTGGTGGTCA CGTCGGCCAC CGTGGTGATT
TACGGCAAGG CGATCTGGGA TCCGATCGAC CTGACGAGCC GCATGACCGG CATCGGCGTG
GGCGTCGCGC TGATCATCCT CACACTCGAC ACCATGTGCT GCAATCTCGC GGCAAATCTC
GTCGGCCCGG CCTATGATTT TTCGAGCCTG TGGCCCAAAG GTATTTCGTA TCGCGTGGGC
GGCATGATCA CCGCGACCAT CGCAATCGTG ATGATGCCGT GGAAGATTCT CGCCACCACG
CAAGGCTATA TCTTTACGTG GCTGGTCGGC TATTCGGCCT TGCTCGGGCC GGTGGCCGGT
ATTCTGATGG TCGACTATTT CCTGATTCGC GGCACGCGCC TCGATACGCG TGAACTGTTC
GACGAACACG GCGAGTACAG CTATACCGGC GGCTGGAATA TCGGCGCGGT GGTCGCGCTC
GTGATCGGCG TGCTGCCGAA TCTGCCGGGC TTTTTGCACA CGGCGTTTCC GGCGTCGTTC
CCGAACGTGC CGGCGATCTT CAATACGCTC TATACGTATG CGTGGTTTGT CGGATTGGCG
TTGGCGTCGA TCGTATACAG CGCGTGGATG AAGCTGAGCA AGGGACCCAG CGCGCGCGTG
GCGAGTGCAT GA
|
|---|
| Protein sequence | MKQTAQPAEP QFATGVQGSS LYNDDLAPTG IAQRTWKWYH FAALWVGMVM NIASYMLAAG
LTEEGMSPWQ AVMTVLLGNL IVLVPMLLIG HAGAKHGIPY AVLVRSSFGT QGAKLPAMLR
AIVACGWYGI QTWLGGSAIY TLLNILTGNA LHGAALPFLD ISLAQLACFL VFWALQIYFI
VHGTDSIRWL ESWSAPIKIV MCIALVWWAT SKAGGLGSML SAPSQFVPGG KKEGMFWITF
WPGLTAMVGF WATLALNIPD FTRFARTQRD QIIGQSVGLP VPMALLSVIS VVVTSATVVI
YGKAIWDPID LTSRMTGIGV GVALIILTLD TMCCNLAANL VGPAYDFSSL WPKGISYRVG
GMITATIAIV MMPWKILATT QGYIFTWLVG YSALLGPVAG ILMVDYFLIR GTRLDTRELF
DEHGEYSYTG GWNIGAVVAL VIGVLPNLPG FLHTAFPASF PNVPAIFNTL YTYAWFVGLA
LASIVYSAWM KLSKGPSARV ASA
|
|---|
| |