| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1415 |
|---|
| Symbol | |
|---|
| ID | 4004411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 3355032 |
|---|
| End bp | 3357143 |
|---|
| Gene Length | 2112 bp |
|---|
| Protein Length | 703 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637948218 |
|---|
| Product | non-hemolytic phospholipase C |
|---|
| Protein accession | YP_559591 |
|---|
| Protein GI | 91784385 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3511] Phospholipase C |
|---|
| TIGRFAM ID | [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAA GAAATCGCCG TGATTTTCTG CGCTCCGCCG CGCATGCAGC CGGTTCCGCC
ACCGCATTGA GCATGCTGCC TCTGGGCATT CGCAATGCGC TCGCCATTCC CGCCAACAAC
AAGACCGGCA CGATTCGCGA CGTCGAGCAC ATCGTCGTGC TGATGCAGGA AAACCGTTCG
TTCGACCACT ACTTCGGCAC GCTCAAAGGC GTGCGCGGTT TTGGCGACAC GCGCGCCATC
AATCTGCCGA ACGGCAAGCC CGTGTGGTAT CAGCCGCTCG CGGCGGATAT CGGCTACGTG
CTGCCGTTCC GCCCCAGCGC GCCCAACCTG GGGCTGCAAT TCCTGCAAGA TCTCGCGCAC
GACTGGACCA GCACGCACGC GGCATGGAAC GGCGGCCGCT ACGATCAATG GGTGCCCGCG
AAAAGCGCCA CGACAATGGC CTACCTCACG CGCGAGGACA TTCCGTTTCA CTATCAACTC
GCCGACGCCT TCACGATCTG CGACGCGTAT CACTGCTCGC TGATGGGACC GACGGACCCG
AATCGCTACT ACATGTGGAG CGGCTGGGTA GGCAATGACG GCAGCGGCGG CGGTCCGGTG
ATCGACAACT CCGAACTCGG CTACGGCTGG TCCACGTATC CCGAAGTGCT ACAGAGCGCG
GGCATTTCGT GGAAGATCTA TCAAGACATC GGCACGGGTC TCGACGCGAA TGGTTCGTGG
GGCTGGACGC AGAATCCGTA TATCGGCAAT TACGGCGATA ACTCGCTGCT CTACTTCAAC
CAGTACCGCA ACGCCCAGCC CGGCAACCCG CTCTACGACA ACGCCCGCAC CGGCACGAAC
GCGGCGAAAG GCGACGGCTA CTTCGACATC CTCAAGCGCG ACGTACAGAA CAACGCGCTG
CCGCAGGTGT CGTGGATCGT CGCGCCCGAA GCCTATTCCG AGCACCCGAA CTGGCCGGCG
AACTACGGCG CGTGGTACAT CGACCAGGTC CTGCAGATTC TCACGTCCAA TCCCGAGGTG
TGGAGCAAGA CGGTGCTTCT GGTGAACTAC GACGAGAACG ACGGCTTCTT CGACCACATG
GCGCCGCCCT TCGCGCCGTC GTCGAGCGCG AACGGTCTGT CCACCGTCGA CACCACCAAC
GAAATCTATA CGGGCGACGC GAAGACTCCC TCCGGCCCGT ATGGACTCGG ACCGCGCGTG
CCGATGCTGG TGGTTTCGCC GTGGTCGAAA GGCGGCTATG TGTGTTCGGA ACTGTTCGAC
CATACGTCGG TGATCCGCTT TATCGAAAAG CGCTTCGGCC ACGACCACAA TCTCGGCGAA
TCGAACATCA CGCCGTGGCG CCGTGCGGTG TGTGGCGATC TGATGTCCGC CTTCAACTTC
AGCAATCCGA ACGACGCCAT CCCGGCGCTG CCGAGCACGA GCGGCTACGT TCCGGCGGAT
CAGAACCGCC ACCCGGACTA CGTGCCGCTG CCGCCGGCCT TGCAGGCCGT GCCGAAACAG
GAGCCCGGCG TGCGCCCCGC CCGTGCGCTG CCCTATGAAC TGTTCGTGCG CGTGCACGGC
GAAGGCGCGG CCAACACACT CACCATGCGC TTCGTCAACA CGGGCCGCGC CGGCGCGGTG
TTTCTCGTCT ACGCCGCTCA CAGTCTCGAC GCACCGCGCA CCTATACGGT GGAAGCCGGC
AAGCGGCTGC AGGACCCGCT GCCGTTGAAT GCCGACGGCA GCTACGACTA CACCGTGTAC
GGCCCGAACG GCTTTCTGCG CCGCTTCGCG GGCAAGCCGG TGTCGCGCAG CTGGTGGCAT
GGCTCGGACA TCGCGCGCCC TGAAGTTGCA GAAGGCTACG ACGTTTCGAA CGGCAACCTG
CAATTGCGGC TGGAGAACGT GGGCAGCGCG CGTTGCCAGT TCACGATCGT CAACGCATAC
GATCCGGGCA ATGCGATCAA GCATTCGGTG CGCGGCGGCG ATACCGAACA GCTCTATCTG
GATCTGCGCA ATGCACATGG CTGGTATGAC CTGGCCATCA CGGTCGATAC CGATCCGCTG
TTCGCGCGGC GCTTTGCCGG ACACGTGGAA ACCGGCAAGA GCAGCATGAG CGATCCTGCG
CTGGGCGCCT GA
|
|---|
| Protein sequence | MTSRNRRDFL RSAAHAAGSA TALSMLPLGI RNALAIPANN KTGTIRDVEH IVVLMQENRS
FDHYFGTLKG VRGFGDTRAI NLPNGKPVWY QPLAADIGYV LPFRPSAPNL GLQFLQDLAH
DWTSTHAAWN GGRYDQWVPA KSATTMAYLT REDIPFHYQL ADAFTICDAY HCSLMGPTDP
NRYYMWSGWV GNDGSGGGPV IDNSELGYGW STYPEVLQSA GISWKIYQDI GTGLDANGSW
GWTQNPYIGN YGDNSLLYFN QYRNAQPGNP LYDNARTGTN AAKGDGYFDI LKRDVQNNAL
PQVSWIVAPE AYSEHPNWPA NYGAWYIDQV LQILTSNPEV WSKTVLLVNY DENDGFFDHM
APPFAPSSSA NGLSTVDTTN EIYTGDAKTP SGPYGLGPRV PMLVVSPWSK GGYVCSELFD
HTSVIRFIEK RFGHDHNLGE SNITPWRRAV CGDLMSAFNF SNPNDAIPAL PSTSGYVPAD
QNRHPDYVPL PPALQAVPKQ EPGVRPARAL PYELFVRVHG EGAANTLTMR FVNTGRAGAV
FLVYAAHSLD APRTYTVEAG KRLQDPLPLN ADGSYDYTVY GPNGFLRRFA GKPVSRSWWH
GSDIARPEVA EGYDVSNGNL QLRLENVGSA RCQFTIVNAY DPGNAIKHSV RGGDTEQLYL
DLRNAHGWYD LAITVDTDPL FARRFAGHVE TGKSSMSDPA LGA
|
|---|
| |